Detailed information NTG0730688

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: N5O86_RS24575
• Genome accession: NZ_CP104581
• Coordinates: 5399135..5400355 (+)
• Length: 406 a.a.
• NCBI ID: WP_016454145.1
• Uniprot ID: A0A7T2YY92
• Organism: Delftia tsuruhatensis strain GD03927
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5394135..5405355

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5O86_RS24555 (N5O86_24605)	coaD	5394905..5395405 (-)	501	WP_016449072.1	pantetheine-phosphate adenylyltransferase	-
N5O86_RS24560 (N5O86_24610)	rsmD	5395536..5396243 (-)	708	WP_016449073.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
N5O86_RS24565 (N5O86_24615)	-	5396240..5397601 (-)	1362	WP_046985885.1	pitrilysin family protein	-
N5O86_RS24570 (N5O86_24620)	-	5397628..5399106 (-)	1479	WP_016449075.1	pitrilysin family protein	-
N5O86_RS24575 (N5O86_24625)	pilA	5399135..5400355 (+)	1221	WP_016454145.1	signal recognition particle-docking protein FtsY	Machinery gene
N5O86_RS24580 (N5O86_24630)	-	5401288..5402025 (+)	738	WP_279493177.1	GntR family transcriptional regulator	-
N5O86_RS24585 (N5O86_24635)	-	5402549..5403478 (+)	930	WP_061288227.1	DMT family transporter	-
N5O86_RS24590 (N5O86_24640)	-	5403802..5404791 (+)	990	WP_279493178.1	tripartite tricarboxylate transporter substrate binding protein	-
N5O86_RS24595 (N5O86_24645)	cutA	5404778..5405176 (-)	399	WP_279493179.1	divalent-cation tolerance protein CutA	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42489.36 Da
• Isoelectric Point: 5.5295

>NTDB_id=730688 N5O86_RS24575 WP_016454145.1 5399135..5400355(+) (pilA) [Delftia tsuruhatensis strain GD03927]
MFSFFKKKPTPSSAEISPADSSAAPEEAGIPATPPQDRAPDLPPGTPAPPAAADTGSAWWRKPFGGGKGDAAPPAAPAAP
TAAASTLAPADFIAAPEPTAKPEAEGASRQNWMQRLKAGLRKTGNSIATVFTGTQINDALYEELEDALLMADTGVKATEH
LLTELRRRVKEAKATDPAAVKALLADALADLLRPLEKPLIIGEHQPTVVMVAGVNGAGKTTSIGKLTKHLADEGQSVLLA
AADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVTKAD
ATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREF
AQALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=730688 N5O86_RS24575 WP_016454145.1 5399135..5400355(+) (pilA) [Delftia tsuruhatensis strain GD03927]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCTCCGCCGAGATTTCCCCGGCGGACAGCAGCGCCGCGCCTGAAGA
GGCCGGCATTCCCGCAACCCCGCCGCAGGACCGCGCCCCAGACCTGCCCCCTGGCACACCTGCCCCACCGGCCGCAGCCG
ACACCGGCAGCGCCTGGTGGCGCAAGCCCTTCGGCGGCGGCAAGGGCGATGCCGCCCCGCCTGCCGCACCCGCTGCACCC
ACTGCTGCTGCTTCCACGCTCGCGCCTGCCGACTTCATTGCCGCACCCGAGCCCACGGCCAAGCCCGAAGCCGAAGGCGC
CAGCCGCCAGAACTGGATGCAGCGCCTCAAGGCCGGACTGCGCAAGACCGGCAACAGCATCGCCACGGTCTTCACCGGCA
CGCAGATCAACGATGCGCTGTACGAAGAGCTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCAC
CTGCTCACCGAACTGCGCCGCCGCGTCAAGGAAGCCAAGGCCACCGACCCTGCAGCCGTCAAGGCCCTGCTGGCCGATGC
ACTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGATCATCGGCGAGCACCAGCCTACCGTGGTCATGGTCGCTGGCG
TCAACGGCGCAGGCAAGACCACCTCCATCGGCAAGCTGACCAAGCATCTGGCCGACGAAGGCCAGAGCGTGCTGCTGGCT
GCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTCGGCGTCTGGGCCAACCGCAACACGGTGGAGATCGTCAGCCA
GGAAGGCGGTGATCCTGCAGCCGTGAGCTTTGATGCCGTCACCGCCGGCCGCGCCCGCAAGAAGGATGTGGTGCTGGTGG
ACACGGCGGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCACCAAGGCCGAT
GCCACGGCACCGCACGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTTGA
CGATGCACTGCAGCTCACGGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCCGCCATTGCCC
AGGAACGGCCGATCCCCGTGTACTTCATCGGCGTGGGCGAAAAGGTCGAAGACCTGGAGACCTTCAACGCCAGGGAATTC
GCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (125-188)

3D structure

• AlphaFold DB: A0A7T2YY92

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	47.991	100	0.5