Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   N5C46_RS06620 Genome accession   NZ_CP104558
Coordinates   1284864..1285052 (-) Length   62 a.a.
NCBI ID   WP_034763435.1    Uniprot ID   A0A366EMK4
Organism   Rossellomorea vietnamensis strain RL-WG62     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1279864..1290052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N5C46_RS06595 (N5C46_06595) - 1280414..1281163 (-) 750 WP_261751399.1 YjbA family protein -
  N5C46_RS06605 (N5C46_06605) - 1281608..1282369 (-) 762 WP_261751401.1 DUF2268 domain-containing protein -
  N5C46_RS06610 (N5C46_06610) fabF 1282465..1283709 (-) 1245 WP_261751402.1 beta-ketoacyl-ACP synthase II -
  N5C46_RS06615 (N5C46_06615) - 1283761..1284693 (-) 933 WP_159361745.1 beta-ketoacyl-ACP synthase III -
  N5C46_RS06620 (N5C46_06620) comZ 1284864..1285052 (-) 189 WP_034763435.1 ComZ family protein Regulator
  N5C46_RS06625 (N5C46_06625) med 1285049..1286017 (-) 969 WP_261751403.1 BMP family ABC transporter substrate-binding protein Regulator
  N5C46_RS06630 (N5C46_06630) - 1286119..1286838 (-) 720 WP_261751404.1 hypothetical protein -
  N5C46_RS06635 (N5C46_06635) - 1286861..1287604 (-) 744 WP_261751405.1 hydrolase -
  N5C46_RS06640 (N5C46_06640) - 1287898..1288035 (+) 138 WP_336275582.1 DUF2929 family protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7280.37 Da        Isoelectric Point: 4.2508

>NTDB_id=730504 N5C46_RS06620 WP_034763435.1 1284864..1285052(-) (comZ) [Rossellomorea vietnamensis strain RL-WG62]
MNQDKTMEFMQIAMKYFPQAKEQLDQAGVEFSPEMLQPFMTLFTQVMSEAYELGKQDALHKE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=730504 N5C46_RS06620 WP_034763435.1 1284864..1285052(-) (comZ) [Rossellomorea vietnamensis strain RL-WG62]
ATGAATCAAGACAAAACAATGGAGTTTATGCAGATTGCCATGAAGTATTTCCCCCAAGCGAAAGAACAACTCGATCAAGC
GGGAGTCGAGTTCTCTCCTGAAATGCTGCAGCCATTCATGACGCTGTTCACCCAGGTCATGAGTGAAGCTTATGAATTAG
GCAAACAGGATGCCTTACATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366EMK4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

65.517

93.548

0.613