Detailed information NTG0073004

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: Vt282_RS02405
• Genome accession: NZ_AP019649
• Coordinates: 501697..505101 (-)
• Length: 1134 a.a.
• NCBI ID: WP_415663433.1
• Uniprot ID: -
• Organism: Vibrio taketomensis strain C4III282
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 496697..510101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Vt282_RS02390	-	497170..498195 (-)	1026	WP_162062463.1	ABC transporter permease	-
Vt282_RS02395	-	498198..499184 (-)	987	WP_162047135.1	ABC transporter permease	-
Vt282_RS02400	-	499360..501042 (-)	1683	WP_162047134.1	ABC transporter substrate-binding protein	-
Vt282_RS02405	chiS	501697..505101 (-)	3405	WP_415663433.1	response regulator	Regulator
Vt282_RS02410	rsmC	505391..506413 (-)	1023	WP_162062464.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
Vt282_RS02415	-	506581..507666 (-)	1086	WP_162047132.1	AI-2E family transporter	-
Vt282_RS21175	-	507820..507942 (+)	123	WP_269472595.1	hypothetical protein	-
Vt282_RS02420	hemL	507987..509279 (-)	1293	WP_162047131.1	glutamate-1-semialdehyde 2,1-aminomutase	-
Vt282_RS02425	erpA	509544..509885 (+)	342	WP_162047130.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1134 a.a.
• Molecular weight: 128351.80 Da
• Isoelectric Point: 5.6623

>NTDB_id=73004 Vt282_RS02405 WP_415663433.1 501697..505101(-) (chiS) [Vibrio taketomensis strain C4III282]
MESNHLIMFKLYRKQRFKRLQHTLMLAFLALSITPLTVIALFFLHSHSQDLQEQSTSHLISVRDSKQQQIVDYLNARESE
VMGVVRSELAYASGGRFYGLVNAFQNLGLNIEDARQLAQQRYIIGSGDQIKTSILPESEVFNATERYRLLHKRYHGSFLE
LLKRSDFDDILLVDINGNVTYSIYKHDYFGTNLLDGKYHNDNLGKAFKALQDEVAQKRKQSLDYTPVVFSDFAEHEGKSY
AWIGAPIIQQGYLHSYAMFRLPNNSLTKLIADNNNVWSIKTLLVNKNNQLRTLSYSQEDVDNSQSIINQAFTQPTSVGTF
TNSLGEEIIAAHSHIQAKGLDWALVVEVSEKEAFSRIKQLETLFVIAMLVAILVVIVSSHYLSNFITAPLLKLTWSAEKA
SAGDLSAEINTERTDEIGRLATAFERMQRSIREKMQLIREQNEELENNLKLIRKKNEELQLANKLKDEFLATTSHELRTP
LHGMVGIAEALISGANGPIRSEHKYQLGIIISSGQRLTTLVDDLLDYHKMRYGNMDIDTCAVDLSSATRLVLELSSHLLG
NKQIRIINQVPVEPVWVCADPQRLEQVLYNLVGNAIKYTREGKIVISANIVDAKMRVQVVDTGQGIPADQLEHIFEPLIQ
AGDDASRYRQGAGLGLSISRQLVELMGGSLYVSSQPMVGTTFSFTLPLATEDQVAQARHSDSLHFQAPESYAMEETVEAS
LPENPDGELLLVVDDEPVNLRVLDSFLRLAGYRVRTAKDGYEALQSIEEEKPELVLLDVMMPGLSGYQVCESIRESYDNI
ELPVIMLTALNQADDRIRGFNSGANDYLSKPFNKQELAARILVHLSASQAEKRRIENQVLQDELRHRAAVEASLIETQGR
LLEQLESAPEAIVCTRNDNRIRFANEAAARLFKRSVEQLKRSSSEEILAPRFLDISQEHYCGKVDIYVEDMRQHIDADIL
RLPEASGLKSMYIFDNGGGVNAQRINNLETAIEALSSYAFDGDKGKLQQLKELGGEFTRLADRVSSDQKSKQDLMREVLV
DAMTTALDYWESSSGHSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLEYILDNCKDMTKERTK
IEELRDKLQYLLTT

Nucleotide

• Length: 3405 bp

>NTDB_id=73004 Vt282_RS02405 WP_415663433.1 501697..505101(-) (chiS) [Vibrio taketomensis strain C4III282]
ATGGAAAGTAATCATCTCATTATGTTTAAGTTGTACCGCAAACAGAGATTTAAGCGCCTGCAACATACGCTGATGCTAGC
GTTTCTTGCACTTAGCATTACACCGTTGACTGTTATTGCGCTGTTTTTTCTGCATTCACATAGCCAAGACTTACAAGAAC
AAAGCACCTCTCACTTAATTTCTGTTCGAGATAGTAAGCAACAGCAAATTGTCGATTATCTTAACGCAAGGGAATCAGAG
GTTATGGGCGTCGTGCGCTCGGAACTCGCTTATGCCAGCGGTGGCCGCTTCTATGGTTTAGTCAACGCCTTTCAAAACCT
TGGCCTCAACATTGAGGATGCAAGACAATTGGCACAGCAGCGCTATATCATCGGATCAGGTGATCAAATAAAAACGTCAA
TTTTGCCGGAGTCTGAGGTATTTAATGCGACGGAACGCTACCGCCTACTGCACAAGCGTTATCACGGTTCGTTTTTGGAG
TTACTCAAACGCTCTGATTTTGACGACATTTTGCTGGTCGATATTAACGGCAACGTGACGTATTCGATTTATAAGCACGA
CTATTTTGGCACCAACTTACTTGACGGAAAGTACCACAACGACAACTTAGGAAAGGCATTTAAAGCGCTGCAGGACGAAG
TCGCACAGAAAAGAAAACAAAGCCTCGACTATACACCCGTGGTTTTTTCTGACTTTGCTGAACATGAAGGAAAAAGTTAC
GCCTGGATTGGTGCTCCAATTATTCAGCAAGGTTACCTACACAGCTACGCAATGTTCCGCTTGCCGAATAATAGCTTAAC
CAAGTTAATCGCTGACAATAATAACGTCTGGTCGATCAAGACATTATTGGTTAACAAGAACAATCAATTACGCACACTTT
CTTATAGCCAAGAAGATGTTGATAACAGCCAATCGATTATCAATCAAGCGTTTACTCAACCTACCTCAGTTGGCACTTTT
ACCAATAGTTTAGGTGAAGAAATTATCGCCGCTCATAGTCACATTCAAGCTAAAGGATTGGACTGGGCATTAGTGGTCGA
AGTATCAGAAAAAGAGGCATTCTCTCGCATCAAACAACTCGAAACCTTGTTTGTCATCGCGATGCTGGTTGCTATTTTGG
TGGTGATTGTCTCTTCTCACTATTTATCCAATTTCATTACCGCACCATTGCTGAAACTCACTTGGTCAGCCGAAAAAGCC
TCCGCTGGCGATCTCAGTGCGGAGATCAATACTGAACGGACCGATGAAATTGGCCGCTTAGCAACCGCATTTGAACGAAT
GCAACGTTCTATTCGTGAAAAAATGCAGCTGATTCGAGAGCAAAATGAAGAGCTAGAGAACAACCTAAAGTTAATTCGTA
AAAAGAATGAAGAGTTGCAACTGGCCAATAAACTTAAAGATGAGTTCTTAGCAACAACCTCACATGAGCTAAGAACGCCC
TTACACGGTATGGTCGGAATTGCTGAAGCATTAATTTCTGGTGCGAACGGCCCTATTCGTTCCGAGCATAAGTATCAACT
AGGCATCATCATTAGCAGTGGACAGCGTCTAACCACATTAGTGGACGACTTGCTCGACTATCACAAAATGCGTTATGGCA
ATATGGATATCGATACCTGTGCGGTAGACCTATCCAGTGCCACACGCTTAGTACTTGAGCTTTCTTCCCATTTATTAGGC
AATAAACAGATTCGAATTATCAACCAAGTGCCCGTTGAGCCAGTTTGGGTGTGCGCAGATCCGCAACGACTTGAGCAAGT
GCTATATAACTTAGTTGGTAATGCCATCAAATACACGCGTGAAGGCAAGATCGTTATCTCTGCCAATATTGTCGACGCAA
AAATGCGCGTTCAAGTGGTCGATACCGGCCAAGGCATTCCCGCCGATCAGCTGGAGCATATTTTTGAACCTCTGATTCAA
GCTGGCGATGATGCCAGTCGTTACCGTCAAGGTGCAGGATTAGGCCTCTCTATTAGTCGTCAATTAGTTGAACTAATGGG
CGGTTCTTTGTACGTCAGTAGCCAGCCTATGGTCGGCACGACATTTAGCTTTACGTTACCACTAGCCACCGAAGATCAGG
TTGCACAAGCTCGCCATAGTGACAGCTTACATTTCCAAGCTCCTGAAAGTTACGCCATGGAAGAGACGGTAGAGGCGAGT
CTACCGGAAAATCCTGATGGTGAATTGTTACTCGTCGTTGATGACGAACCCGTCAACTTACGCGTTTTAGATAGTTTCCT
TCGTCTCGCCGGCTACCGAGTACGCACAGCAAAAGATGGCTATGAAGCTCTGCAGTCAATCGAAGAAGAGAAACCAGAAC
TTGTGCTGCTGGATGTTATGATGCCTGGCCTGAGTGGTTATCAAGTGTGTGAGTCGATACGTGAAAGCTACGATAATATC
GAGCTTCCAGTAATTATGCTTACCGCGCTCAATCAAGCGGACGACCGAATTCGTGGTTTTAACTCTGGTGCGAATGACTA
TTTATCTAAACCGTTTAATAAGCAGGAACTCGCCGCGCGTATTTTAGTGCACCTATCGGCAAGCCAGGCGGAAAAACGTC
GTATCGAAAACCAAGTGTTGCAAGACGAATTGCGCCACCGCGCGGCCGTTGAAGCCAGCTTGATTGAAACTCAAGGCAGG
CTTTTAGAGCAATTAGAATCAGCACCAGAAGCCATCGTGTGTACACGTAATGACAATCGAATTCGCTTCGCGAATGAGGC
TGCAGCACGACTATTTAAGCGCTCCGTAGAACAACTCAAGCGTTCAAGCTCAGAAGAGATTCTTGCCCCTCGATTCCTCG
ATATCAGCCAAGAACACTACTGCGGGAAGGTTGATATTTATGTGGAAGATATGCGTCAACATATCGATGCAGACATTTTG
CGCCTACCTGAGGCTTCTGGCCTAAAATCAATGTATATCTTTGATAACGGTGGTGGTGTAAACGCTCAACGCATCAATAA
CTTAGAAACTGCAATTGAAGCGCTAAGCAGCTACGCTTTTGATGGTGATAAAGGCAAGCTACAGCAACTGAAAGAGCTCG
GCGGCGAATTTACACGCTTGGCAGATCGCGTTAGCAGTGACCAAAAATCTAAGCAAGATTTGATGCGTGAAGTACTGGTG
GACGCAATGACCACAGCTCTGGATTATTGGGAAAGCTCATCAGGTCACAGCAAATTTACTTTTGCTGAGCAAAGTGGTCT
ATGGCGAGTTTATTTGGACCGTAGTACGCTACAAACTCGAACTCTGGATAAATATTTGCGTATCGAAACTCTACCGAAGA
CGCCACGCTGGCGCACGGTGTTGAATTCACTAGAGTACATTTTAGATAACTGCAAAGATATGACCAAAGAGCGAACTAAG
ATTGAAGAGCTGCGGGATAAGCTGCAGTATTTGCTCACCACTTAG

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (466-531)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (580-689)

• PAS domain (PAS_8) (885-924)

• HAMP domain (HAMP) (382-433)

• Response regulator receiver domain (Response_reg) (731-841)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	73.457	100	0.735