Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   N4S13_RS10405 Genome accession   NZ_CP104392
Coordinates   2042757..2044025 (-) Length   422 a.a.
NCBI ID   WP_010746065.1    Uniprot ID   A0AAW8SVW2
Organism   Enterococcus raffinosus strain HG-5     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2037757..2049025
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N4S13_RS10400 (N4S13_10400) - 2038314..2042639 (-) 4326 WP_141759747.1 PolC-type DNA polymerase III -
  N4S13_RS10405 (N4S13_10405) eeP 2042757..2044025 (-) 1269 WP_010746065.1 RIP metalloprotease RseP Regulator
  N4S13_RS10410 (N4S13_10410) - 2044203..2044997 (-) 795 WP_010746064.1 phosphatidate cytidylyltransferase -
  N4S13_RS10415 (N4S13_10415) - 2044994..2045794 (-) 801 WP_010746063.1 isoprenyl transferase -
  N4S13_RS10420 (N4S13_10420) frr 2045986..2046543 (-) 558 WP_010746062.1 ribosome recycling factor -
  N4S13_RS10425 (N4S13_10425) pyrH 2046545..2047267 (-) 723 WP_010746061.1 UMP kinase -
  N4S13_RS10430 (N4S13_10430) tsf 2047396..2048280 (-) 885 WP_010746060.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46059.77 Da        Isoelectric Point: 6.8586

>NTDB_id=729491 N4S13_RS10405 WP_010746065.1 2042757..2044025(-) (eeP) [Enterococcus raffinosus strain HG-5]
MRTIITFLIVFGVLVIVHEFGHFFFAKRAGILVREFSIGMGPKLIAHMGKDGTTYTLRLLPIGGYVRMAGLEDEETELSP
GMPLSVELTSKNEVHRINTSKKIQLPNSIPMELISADLVDELVIKGYVNGDESQETTYKVQHDATVIEESGTEVRIAPRD
VQFQSAKLGSRILTNFAGPMNNFILTVLLFIALAFLQGGVANYDTNQIGTVQAGSPAAAAGLKDHDTILSVDGKKISTWD
DLTNTVTKKPGKELTIIAEHDGKEKTMQMTPKSVKSNGEKVGQIGVTPYMKTGFGDKVIGGLTQSWDMVKRIFGALGSLF
TGFSLDKLGGPVMMYQMSAEASRAGVKTVIYLMALLSVNLGIVNLLPIPAFDGGKILLNFIEGVRGKPLDPDKEGMITMI
GFGFIMLLMILVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=729491 N4S13_RS10405 WP_010746065.1 2042757..2044025(-) (eeP) [Enterococcus raffinosus strain HG-5]
ATGCGTACGATTATTACGTTTTTAATTGTATTTGGGGTTCTTGTAATCGTTCATGAGTTTGGACATTTTTTCTTTGCAAA
ACGTGCAGGGATTTTGGTTCGTGAATTTTCGATTGGCATGGGGCCTAAACTAATTGCTCATATGGGAAAAGATGGAACTA
CTTATACTTTGCGATTATTGCCGATTGGCGGGTATGTACGAATGGCAGGATTAGAAGATGAAGAAACAGAACTGAGCCCA
GGAATGCCATTGTCTGTGGAATTAACTTCTAAAAATGAGGTTCATCGAATCAATACCAGTAAGAAAATCCAGTTACCAAA
TAGTATTCCAATGGAGTTGATTTCGGCCGACTTAGTGGATGAGCTTGTTATCAAAGGATACGTGAATGGTGATGAAAGTC
AAGAGACGACTTATAAGGTTCAGCATGATGCGACGGTGATTGAAGAGAGCGGAACAGAAGTCCGAATTGCTCCGCGTGAT
GTCCAGTTTCAATCCGCCAAGTTGGGTTCGCGAATCTTGACAAATTTTGCTGGTCCGATGAATAATTTTATATTAACGGT
TCTATTGTTTATTGCTTTAGCATTTCTGCAAGGTGGAGTAGCAAATTACGATACAAATCAAATTGGGACTGTACAAGCTG
GTAGTCCAGCAGCGGCTGCGGGTCTTAAAGATCATGATACAATTCTTTCAGTAGATGGAAAAAAGATTTCCACTTGGGAT
GATCTAACTAATACAGTTACTAAGAAACCCGGAAAAGAATTAACTATCATAGCAGAACATGATGGTAAAGAAAAAACAAT
GCAAATGACACCAAAGAGTGTGAAAAGTAATGGTGAAAAAGTAGGACAAATTGGTGTAACACCTTACATGAAGACAGGCT
TTGGAGATAAAGTGATTGGTGGTTTAACTCAATCATGGGATATGGTTAAAAGAATTTTCGGGGCCTTAGGGTCACTGTTT
ACTGGGTTTAGTTTAGATAAGCTGGGTGGACCGGTGATGATGTATCAAATGTCGGCCGAAGCATCGCGTGCAGGAGTTAA
AACAGTCATCTACCTAATGGCGTTATTATCCGTTAATTTGGGTATTGTTAATTTACTTCCTATTCCGGCTTTTGATGGTG
GTAAAATATTGCTGAATTTTATTGAGGGTGTTCGTGGAAAACCACTTGATCCAGACAAAGAAGGTATGATTACCATGATT
GGATTTGGATTTATCATGCTTTTGATGATATTGGTTACATGGAATGACATTCAGCGTTTCTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(208-268)

Peptidase family M50 (Peptidase_M50)

(6-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

51.168

100

0.519
  eeP Streptococcus thermophilus LMD-9

50.935

100

0.517