Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   N4Q31_RS11170 Genome accession   NZ_CP104391
Coordinates   2194684..2195487 (-) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus safensis strain GX-H6     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2189684..2200487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N4Q31_RS11150 (N4Q31_11150) - 2191893..2192129 (+) 237 WP_039179838.1 DUF2627 domain-containing protein -
  N4Q31_RS11155 (N4Q31_11155) - 2192163..2192900 (-) 738 WP_048239245.1 glycerophosphodiester phosphodiesterase -
  N4Q31_RS11160 (N4Q31_11160) - 2193127..2194227 (-) 1101 WP_251180467.1 Rap family tetratricopeptide repeat protein -
  N4Q31_RS11165 (N4Q31_11165) - 2194215..2194412 (-) 198 WP_047202271.1 hypothetical protein -
  N4Q31_RS11170 (N4Q31_11170) spo0A 2194684..2195487 (-) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  N4Q31_RS11175 (N4Q31_11175) spoIVB 2195773..2197050 (-) 1278 WP_039179850.1 SpoIVB peptidase -
  N4Q31_RS11180 (N4Q31_11180) recN 2197250..2198983 (-) 1734 WP_126681610.1 DNA repair protein RecN Machinery gene
  N4Q31_RS11185 (N4Q31_11185) ahrC 2199017..2199466 (-) 450 WP_024422938.1 transcriptional regulator AhrC/ArgR -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=729433 N4Q31_RS11170 WP_024422935.1 2194684..2195487(-) (spo0A) [Bacillus safensis strain GX-H6]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=729433 N4Q31_RS11170 WP_024422935.1 2194684..2195487(-) (spo0A) [Bacillus safensis strain GX-H6]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTTTTGACAGAGTACATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATTATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACAAAACAG
CCAAGTGTGATTATGCTAACGGCCTTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCTTATTTCAT
TTTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCAATCCAAAACAGTGTTCTTCGCAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACCATT
ATTCATGAGATTGGCGTGCCCGCTCATATTAAAGGGTATTTATACTTAAGAGAAGCGATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATTACTAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACCGCCAGCAGGGTGGAAC
GGGCGATTCGTCATGCCATTGAAGTCGCTTGGAGCAGAGGGAACATTGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTTTGAGATTAGAGCATAGAGCTAG
CTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884