Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   N4R43_RS11590 Genome accession   NZ_CP104388
Coordinates   2300930..2301631 (-) Length   233 a.a.
NCBI ID   WP_058223189.1    Uniprot ID   -
Organism   Lactococcus lactis strain LJL7m20     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 2295930..2306631
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N4R43_RS11570 (N4R43_11585) - 2296001..2297218 (-) 1218 WP_058223190.1 cysteine desulfurase -
  N4R43_RS11575 (N4R43_11590) sufD 2297218..2298474 (-) 1257 WP_021722250.1 Fe-S cluster assembly protein SufD -
  N4R43_RS11580 (N4R43_11595) sufC 2298651..2299421 (-) 771 WP_004255181.1 Fe-S cluster assembly ATPase SufC -
  N4R43_RS11585 (N4R43_11600) - 2299596..2300927 (-) 1332 WP_021722251.1 glycosyltransferase family 4 protein -
  N4R43_RS11590 (N4R43_11605) mecA 2300930..2301631 (-) 702 WP_058223189.1 adaptor protein MecA Regulator
  N4R43_RS11595 (N4R43_11610) - 2301761..2302495 (-) 735 WP_004255171.1 amino acid ABC transporter ATP-binding protein -
  N4R43_RS11600 (N4R43_11615) - 2302495..2303181 (-) 687 WP_004255158.1 amino acid ABC transporter permease -
  N4R43_RS11605 (N4R43_11620) - 2303328..2304236 (-) 909 WP_058223188.1 diacylglycerol kinase family protein -

Sequence

Protein


Download         Length: 233 a.a.        Molecular weight: 27091.48 Da        Isoelectric Point: 4.1246

>NTDB_id=729353 N4R43_RS11590 WP_058223189.1 2300930..2301631(-) (mecA) [Lactococcus lactis strain LJL7m20]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNLGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGTKKDEAEQEPDFIYYSIRYEDIMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKEKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLIATRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=729353 N4R43_RS11590 WP_058223189.1 2300930..2301631(-) (mecA) [Lactococcus lactis strain LJL7m20]
ATGAAATATGAGGATATAAACGAAAATACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAATT
ATCAGACTTTTTCGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTGGTTGATGAGCTTGGTTTAGAAAATCGCT
TTGGAAATTTGGGAATGTTAACTTTCCAAATCCAACCTTTTCCTCAAGGTGTTCATATGATTGTTCATGAAGAAGCGATG
CTAGGTGAAGGTGGAGAAATTCCAGATGACCCAGAAGAGTTTGAAGAATTGATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGGCTTGGTTTACCAGGAACAAAAAAAGACG
AAGCTGAACAAGAGCCAGATTTTATTTATTACTCTATTCGTTATGAAGATATTATGTCTGTCTTAACAGGAATAAAAAAT
GTGAAGTTTGCTGATGAAGAATCAGAGTTTTATCGTTATGATGGCAATTTTTATCTTGTTGTTTTGGATAATCAAAAAGA
AAAAGGCAAGATGCATGTTGAAAGTACCCGTTCACGAATGATGGAATATGGGGAAGCAACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGTCTTATCGCGACACGTGCTTTAGATGTTCTTAGAAAAATCTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

99.142

100

0.991
  mecA Lactococcus lactis subsp. cremoris KW2

96.567

100

0.966