Detailed information NTG0729030

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: N4267_RS18035
• Genome accession: NZ_CP104355
• Coordinates: 942980..945553 (-)
• Length: 857 a.a.
• NCBI ID: WP_134987611.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain PNUSAV001140
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 937980..950553

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N4267_RS18020 (N4267_18020)	-	938720..940408 (-)	1689	WP_057558270.1	ABC transporter ATP-binding protein	-
N4267_RS18025 (N4267_18025)	-	940401..942053 (-)	1653	WP_095473170.1	ABC transporter ATP-binding protein	-
N4267_RS18030 (N4267_18030)	-	942323..942988 (+)	666	WP_000268201.1	flagellar brake protein	-
N4267_RS18035 (N4267_18035)	luxQ	942980..945553 (-)	2574	WP_134987611.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
N4267_RS18040 (N4267_18040)	luxP	945571..946665 (-)	1095	WP_113628575.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
N4267_RS18045 (N4267_18045)	traF	946877..948037 (-)	1161	WP_071178790.1	conjugal transfer protein TraF	-
N4267_RS18050 (N4267_18050)	-	948139..948444 (-)	306	WP_134987612.1	GIY-YIG nuclease family protein	-
N4267_RS18055 (N4267_18055)	-	948444..949094 (-)	651	WP_001025632.1	YceH family protein	-
N4267_RS18060 (N4267_18060)	-	949136..949333 (-)	198	WP_001246073.1	hypothetical protein	-
N4267_RS18065 (N4267_18065)	-	949521..949841 (+)	321	WP_001089529.1	DUF496 family protein	-
N4267_RS18070 (N4267_18070)	-	950254..950505 (+)	252	WP_001882582.1	YgjV family protein	-

Sequence

Protein

• Length: 857 a.a.
• Molecular weight: 97067.99 Da
• Isoelectric Point: 6.1464

>NTDB_id=729030 N4267_RS18035 WP_134987611.1 942980..945553(-) (luxQ) [Vibrio cholerae strain PNUSAV001140]
MNIRPSQIKHKQRIASFITHAVVVVMGVLIVSVLFQSYQISSRLMAQEGQRTSVQTSSLIQSLFDFRLAALRIHQDSTAK
NISLINALVSRDSSRLDAFFSSVDELELSNAPDLRFISSHDNILWDDGNASFYGIAQQELNKLIRRVAISGNWHLVQTSG
DGKPVHLLMRRSSLIETGTGQVVGYLYVGIVLNDNFALLENIRSGSNSENLVLTVDTTPLVSTLKGNEPYSLDYVVHSGK
DVMRDSFIVGQTFLEVENVPTYLCVYSIQTNQNVLTLRDNFYFWMAFALLSMIGVSIASRWWLQKRIQREIETLMNYTHK
LMELDTKIQFAGSKIYEFDYFGRTLEQSFRRLANKEKQFEDLFNFALSPTMLWNTSGRLIRMNPSAQIQFLREDAQNHFL
FEILERQLLPTIINAAQGNNPSDVTTEVDGRVYRWNLSPIMVEGQIISIITQGQDITTIAEAEKQSQAARREAEESARVR
AEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVC
AIDRIYRPLCHEKGLELVVNSNITTATIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDPLAQLVIQVVDTGI
GIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVERPDAPQQLLPAP
DPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTHTIKKVLH
LPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHFKYHHGQKNAGLN

Nucleotide

• Length: 2574 bp

>NTDB_id=729030 N4267_RS18035 WP_134987611.1 942980..945553(-) (luxQ) [Vibrio cholerae strain PNUSAV001140]
TTGAACATTCGACCTAGCCAAATCAAGCATAAACAGCGCATCGCTTCATTTATCACCCATGCTGTCGTGGTGGTGATGGG
CGTTCTGATCGTCAGTGTATTATTCCAAAGTTACCAGATCAGTAGCCGTTTGATGGCTCAAGAAGGACAACGCACCTCAG
TTCAAACCTCCAGCTTGATTCAAAGTTTGTTTGATTTTCGTCTTGCGGCACTGCGAATTCACCAAGACAGCACAGCCAAA
AATATCAGTTTAATCAATGCACTTGTCAGCCGAGATTCGAGTCGGTTGGATGCGTTTTTTTCCAGTGTCGATGAACTTGA
ACTCTCTAATGCGCCAGATCTGCGTTTTATCTCCAGTCACGACAACATCTTGTGGGATGATGGCAACGCCTCTTTTTACG
GCATTGCCCAGCAAGAGCTGAATAAGCTTATCCGCAGAGTGGCGATCAGTGGCAATTGGCATTTGGTTCAAACGTCTGGC
GATGGTAAACCCGTGCATTTGTTAATGCGCCGCTCATCACTGATTGAAACAGGAACTGGGCAGGTGGTTGGGTACCTGTA
TGTGGGAATCGTACTCAATGATAACTTTGCGCTGTTGGAAAATATCCGCAGTGGCAGTAACTCAGAAAACCTAGTTCTGA
CCGTAGACACCACACCGCTGGTCTCCACTTTGAAAGGCAATGAACCTTATTCGCTGGACTATGTGGTGCACAGTGGAAAA
GATGTCATGAGGGACAGCTTTATTGTTGGCCAAACCTTCTTAGAAGTAGAAAATGTACCGACCTATCTGTGCGTCTACTC
GATTCAGACCAACCAAAATGTGCTCACCCTGCGGGATAATTTCTATTTTTGGATGGCGTTTGCGCTGCTCAGTATGATTG
GTGTTTCCATAGCATCACGCTGGTGGTTACAAAAACGTATTCAGCGAGAAATCGAAACCCTAATGAATTACACCCATAAA
TTGATGGAGCTGGACACCAAGATCCAGTTTGCTGGTTCTAAAATTTATGAGTTCGACTATTTTGGGCGAACGTTGGAACA
ATCATTCCGTCGTCTCGCCAATAAAGAAAAGCAGTTTGAAGATCTGTTTAACTTTGCGCTCTCACCGACCATGCTTTGGA
ATACCTCTGGTCGGCTGATCCGCATGAATCCCTCAGCGCAAATCCAGTTTTTGCGCGAAGATGCGCAAAACCATTTCTTA
TTTGAGATTCTTGAACGCCAACTGTTGCCGACCATCATTAATGCGGCACAGGGCAATAATCCGAGTGACGTCACAACCGA
AGTAGATGGTCGTGTGTACCGCTGGAACCTTTCGCCGATCATGGTGGAAGGGCAGATCATTTCCATCATTACTCAAGGGC
AAGATATCACCACCATCGCGGAAGCGGAGAAACAAAGCCAAGCCGCAAGGCGCGAAGCGGAAGAGTCGGCACGGGTCAGA
GCCGAGTTTTTGGCCAAAATGAGCCACGAATTGCGCACGCCGCTCAATGGTGTGCTCGGCGTTTCCCAACTGCTAAAACG
GACCCCACTCAATGACGAACAGCGCGAACACGTGGCTGTGTTATGCAGCAGTGGTGAACATTTGCTCGCTGTGTTGAATG
ACATCTTGGATTTCTCACGCTTAGAGCAGGGCAAATTCCGTATTCAAAAGAATGAGTTTCGCCTTAAAGAGCTGGTGTGC
GCGATTGACCGCATTTATCGACCTTTATGTCATGAAAAAGGTTTGGAACTGGTGGTGAATTCCAATATCACCACCGCTAC
CATTGTGCGCAGCGATCAGATCCGGATTAACCAAATCTTGTTCAATTTGCTCAATAACGCGATCAAGTTTACTCACCAAG
GTTCGATACGTGTCGAATTGCAATTAATTGAAGGCGATCCGTTAGCTCAGTTGGTGATTCAAGTCGTCGATACGGGGATT
GGTATACGCGAACAAGATTTAACGGTGATTTTTGAACCCTTCATGCAGGCTGAATCGACCACCACTCGAGAGTACGGCGG
AAGTGGTTTAGGCTTAACGATTGTGCACAGCTTAGTGGAAATGCTCAGTGGCCAACTGCACGTCAGCTCCGAGTATGGCA
TCGGTACACGTTTTGAAATTCAGTTACCGATTGAGCTGGTAGAAAGACCGGATGCTCCGCAGCAGTTGTTACCGGCTCCT
GATCCTCAACCGTTATTTGATAAAACTCTGCGTGTACTGTTGGTGGAGGATAACCACACCAACGCCTTTATTGCTCAAGC
ATTCTGTCGTAAGTATGGCTTAGATGTGAGCTGGGTAACCGATGGACTACAGGCGATTGAAGAGCTCAAAATACATGACT
ACGACTTAGTGCTGATGGATAACCAGTTACCCTATCTGGATGGCGTTGAGACCACGCACACCATCAAAAAAGTACTGCAC
CTTCCGGTGGTGGTGTATGCCTGTACTGCGGATGGCTTAGAAGAAACACGGCAAGCATTTTTCCATGCGGGCGCGGAATA
TGTATTAGTGAAGCCGCTGAAAGAGCAGACTTTGCATAAAGCGCTGGAGCATTTCAAATATCATCATGGCCAAAAAAACG
CTGGCTTAAATTGA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (592-705)

• Response regulator receiver domain (Response_reg) (732-842)

• His Kinase A (phospho-acceptor) domain (HisKA) (480-544)

• LuxQ, periplasmic (LuxQ-periplasm) (41-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	97.316	100	0.973