Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   N2A95_RS02660 Genome accession   NZ_CP104190
Coordinates   537498..538757 (+) Length   419 a.a.
NCBI ID   WP_004235275.1    Uniprot ID   -
Organism   Streptococcus parauberis strain HFTC0064     
Function   processing of ComS (predicted from homology)   
Competence regulation

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
ICE 536200..585510 537498..538757 within 0


Gene organization within MGE regions


Location: 536200..585510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N2A95_RS02655 (N2A95_02655) - 536675..537469 (+) 795 WP_003104075.1 phosphatidate cytidylyltransferase -
  N2A95_RS02660 (N2A95_02660) eeP 537498..538757 (+) 1260 WP_004235275.1 RIP metalloprotease RseP Regulator
  N2A95_RS02665 (N2A95_02665) - 538781..540637 (+) 1857 WP_003105719.1 proline--tRNA ligase -
  N2A95_RS02670 (N2A95_02670) - 540767..541576 (+) 810 WP_004235268.1 DUF975 family protein -
  N2A95_RS02675 (N2A95_02675) - 541690..546087 (+) 4398 WP_004235267.1 PolC-type DNA polymerase III -
  N2A95_RS02680 (N2A95_02680) - 546181..546606 (+) 426 WP_003105345.1 MarR family winged helix-turn-helix transcriptional regulator -
  N2A95_RS02685 (N2A95_02685) - 546744..547358 (+) 615 WP_037619976.1 nitroreductase family protein -
  N2A95_RS02690 (N2A95_02690) - 547653..548201 (+) 549 WP_175282155.1 NADPH-dependent FMN reductase -
  N2A95_RS02695 (N2A95_02695) def 548377..548991 (-) 615 WP_004235265.1 peptide deformylase -
  N2A95_RS02700 (N2A95_02700) - 549235..549579 (+) 345 WP_004235264.1 hypothetical protein -
  N2A95_RS02705 (N2A95_02705) ppk1 549672..551798 (-) 2127 WP_004235258.1 polyphosphate kinase 1 -
  N2A95_RS02710 (N2A95_02710) - 551802..552722 (-) 921 WP_003104223.1 exopolyphosphatase -
  N2A95_RS02715 (N2A95_02715) - 553004..554167 (+) 1164 WP_004235256.1 MFS transporter -
  N2A95_RS02720 (N2A95_02720) rpsO 554309..554578 (+) 270 WP_003105611.1 30S ribosomal protein S15 -
  N2A95_RS02725 (N2A95_02725) pnp 555360..557606 (+) 2247 WP_004235249.1 polyribonucleotide nucleotidyltransferase -
  N2A95_RS02730 (N2A95_02730) - 557599..558354 (+) 756 WP_004235248.1 SseB family protein -
  N2A95_RS02735 (N2A95_02735) cysE 558367..558951 (+) 585 WP_003104753.1 serine O-acetyltransferase -
  N2A95_RS02740 (N2A95_02740) cysS 558973..560316 (+) 1344 WP_003104180.1 cysteine--tRNA ligase -
  N2A95_RS02745 (N2A95_02745) - 560309..560704 (+) 396 WP_003103081.1 Mini-ribonuclease 3 -
  N2A95_RS02750 (N2A95_02750) - 560825..561259 (+) 435 WP_004235244.1 hypothetical protein -
  N2A95_RS02755 (N2A95_02755) rlmB 561363..562112 (+) 750 WP_003104840.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB -
  N2A95_RS02760 (N2A95_02760) - 562122..562634 (+) 513 WP_004235237.1 NYN domain-containing protein -
  N2A95_RS02765 (N2A95_02765) - 562996..563292 (+) 297 WP_004235217.1 hypothetical protein -
  N2A95_RS02770 (N2A95_02770) - 563433..564293 (+) 861 WP_004235216.1 DegV family protein -
  N2A95_RS02775 (N2A95_02775) rplM 564497..564943 (+) 447 WP_003104162.1 50S ribosomal protein L13 -
  N2A95_RS02780 (N2A95_02780) rpsI 564964..565356 (+) 393 WP_003104965.1 30S ribosomal protein S9 -
  N2A95_RS02785 (N2A95_02785) - 565487..566641 (-) 1155 WP_004235212.1 site-specific integrase -
  N2A95_RS02790 (N2A95_02790) - 566709..567260 (-) 552 WP_004235211.1 helix-turn-helix domain-containing protein -
  N2A95_RS02795 (N2A95_02795) - 567425..567718 (+) 294 WP_004235210.1 hypothetical protein -
  N2A95_RS02800 (N2A95_02800) - 567854..568132 (+) 279 WP_000134669.1 hypothetical protein -
  N2A95_RS02805 (N2A95_02805) - 568138..568464 (+) 327 WP_004235207.1 replication initiator protein A -
  N2A95_RS02810 (N2A95_02810) - 568467..569108 (+) 642 WP_004235206.1 hypothetical protein -
  N2A95_RS02815 (N2A95_02815) - 569331..570206 (+) 876 WP_004235205.1 replication initiation factor family protein -
  N2A95_RS02820 (N2A95_02820) - 570242..570640 (+) 399 WP_004235204.1 hypothetical protein -
  N2A95_RS02825 (N2A95_02825) mobV 570949..572253 (+) 1305 WP_004235202.1 MobV family relaxase -
  N2A95_RS02830 (N2A95_02830) - 572420..572887 (+) 468 WP_004235200.1 hypothetical protein -
  N2A95_RS02835 (N2A95_02835) - 573258..573353 (+) 96 WP_371106285.1 type I toxin-antitoxin system Fst family toxin -
  N2A95_RS02840 (N2A95_02840) - 574358..574522 (+) 165 WP_004235198.1 hypothetical protein -
  N2A95_RS02845 (N2A95_02845) - 574704..576551 (+) 1848 Protein_563 heavy metal translocating P-type ATPase -
  N2A95_RS02850 (N2A95_02850) - 576631..576858 (+) 228 WP_004235191.1 heavy-metal-associated domain-containing protein -
  N2A95_RS02855 (N2A95_02855) - 576873..577151 (+) 279 WP_004235189.1 hypothetical protein -
  N2A95_RS02860 (N2A95_02860) - 577179..577832 (+) 654 WP_004235187.1 Crp/Fnr family transcriptional regulator -
  N2A95_RS02865 (N2A95_02865) - 578033..578278 (+) 246 WP_004235185.1 VOC family protein -
  N2A95_RS02870 (N2A95_02870) - 578569..578874 (+) 306 WP_004235183.1 hypothetical protein -
  N2A95_RS02875 (N2A95_02875) - 578949..579080 (+) 132 WP_233847639.1 hypothetical protein -
  N2A95_RS02880 (N2A95_02880) - 579114..579212 (+) 99 Protein_570 2-oxo acid dehydrogenase subunit E2 -
  N2A95_RS02885 (N2A95_02885) - 579958..580512 (+) 555 WP_004235180.1 GNAT family N-acetyltransferase -
  N2A95_RS02890 (N2A95_02890) - 580675..581310 (-) 636 WP_076751776.1 elongation factor G-binding protein -
  N2A95_RS02895 (N2A95_02895) - 581459..581809 (+) 351 WP_003105326.1 hypothetical protein -
  N2A95_RS02900 (N2A95_02900) - 581939..584653 (+) 2715 WP_004235174.1 GBS Bsp-like repeat-containing protein -
  N2A95_RS02905 (N2A95_02905) - 584793..585497 (+) 705 WP_003103023.1 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 46207.06 Da        Isoelectric Point: 9.5477

>NTDB_id=727932 N2A95_RS02660 WP_004235275.1 537498..538757(+) (eeP) [Streptococcus parauberis strain HFTC0064]
MLGLFTFIIIFGILVIVHEFGHFYFAKKSGILVREFAIGMGPKIFSQVDKEGTLYTIRILPLGGYVRMAGWGDDTTEIKT
GTPVTLTLNEQGLVKRINLSQNKIDPTSLPMNVTAYDLEDRLEITGLVIDERKTYAVDHDATIVEEDGTEIRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGLVVFIVLAFVQGGVPDYNSNQIRVVDNGPAAKAGIKSDDQIIKINQYPVKNWEDLTQ
AVQQSTQKLADNQSLQVTTLSHGKKKIVNLKPKKNGKQYIIGVQTKIKTSLKDKIVGGFEMSVRGALLIITALKNLITGF
SLDKLGGPVAMYQMSNQAANSGIESVLSLMAMLSINLGIFNLIPIPALDGGKIFINLIEAIRRKPLKQETESYITLAGVA
IMVLLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=727932 N2A95_RS02660 WP_004235275.1 537498..538757(+) (eeP) [Streptococcus parauberis strain HFTC0064]
ATGTTAGGTTTATTTACCTTTATTATCATCTTTGGAATATTAGTCATTGTCCATGAATTTGGACATTTCTATTTTGCAAA
GAAGTCTGGTATTTTAGTTCGTGAGTTTGCAATAGGGATGGGTCCGAAAATCTTTTCACAAGTTGACAAAGAAGGAACCC
TTTACACTATTCGTATTTTACCTTTAGGTGGTTATGTTCGCATGGCCGGCTGGGGTGATGACACAACTGAAATAAAAACT
GGAACACCGGTCACTTTGACCTTGAATGAACAAGGGCTGGTTAAACGAATTAACTTATCTCAAAATAAGATTGATCCAAC
AAGTTTGCCTATGAATGTGACCGCTTATGACTTAGAAGATAGGCTTGAAATCACAGGATTGGTGATTGATGAACGCAAAA
CTTATGCGGTTGATCATGACGCAACAATTGTTGAAGAAGACGGCACAGAAATTCGCATCGCCCCCAAAGATGTTCAGTAT
CAAAATGCTAGCATCTGGGGAAGATTGATCACGAACTTTGCTGGCCCGATGAACAACTTCATACTTGGCTTGGTCGTCTT
CATCGTCTTAGCCTTCGTTCAAGGCGGTGTTCCTGACTATAATTCAAATCAGATCCGTGTTGTGGACAATGGTCCTGCTG
CCAAAGCTGGGATTAAATCTGATGATCAAATTATCAAAATCAATCAGTACCCTGTTAAAAATTGGGAAGATTTAACACAA
GCTGTTCAACAGTCAACCCAAAAATTAGCAGACAACCAAAGCTTGCAAGTGACAACGCTGTCGCATGGCAAGAAAAAAAT
AGTTAACTTAAAACCCAAAAAGAATGGCAAACAATATATCATTGGTGTTCAGACCAAGATAAAAACAAGTCTCAAAGATA
AAATTGTTGGCGGCTTTGAAATGTCTGTTCGCGGAGCTTTGTTAATTATTACAGCACTGAAAAATTTAATCACAGGTTTT
AGTCTTGATAAATTAGGTGGGCCCGTGGCCATGTACCAAATGTCTAATCAGGCTGCTAATAGTGGCATTGAGTCAGTGTT
ATCTTTGATGGCTATGCTATCAATCAACCTTGGAATCTTTAATTTAATCCCGATTCCAGCACTTGACGGTGGTAAAATTT
TCATCAACTTAATTGAAGCTATTCGTCGGAAACCACTGAAACAAGAAACTGAATCTTATATTACGCTTGCAGGTGTTGCA
ATTATGGTCTTATTGATGATTGCAGTAACTTGGAACGATATTATGCGTGCTTTTTTCTAA

Domains


Predicted by InterproScan.

(205-247)

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.095

100

0.683

  eeP Streptococcus thermophilus LMD-9

67.857

100

0.68