Detailed information NTG0727531

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: N1207_RS02125
• Genome accession: NZ_CP104097
• Coordinates: 420391..421539 (+)
• Length: 382 a.a.
• NCBI ID: WP_043940053.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain GL-4
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 415391..426539

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N1207_RS02105 (N1207_02105)	yclH	415767..416447 (-)	681	WP_041850693.1	ABC transporter ATP-binding protein	-
N1207_RS02110 (N1207_02110)	yclI	416463..417923 (-)	1461	WP_041850694.1	ABC transporter permease	-
N1207_RS02115 (N1207_02115)	yclJ	418136..418819 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
N1207_RS02120 (N1207_02120)	yclK	418806..420227 (+)	1422	WP_072173981.1	two-component system sensor histidine kinase YclK	-
N1207_RS02125 (N1207_02125)	rapC	420391..421539 (+)	1149	WP_043940053.1	response regulator aspartate phosphatase RapC	Regulator
N1207_RS02130 (N1207_02130)	phrC	421523..421645 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
N1207_RS02135 (N1207_02135)	yczM	421747..421836 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
N1207_RS02140 (N1207_02140)	yczN	421918..422031 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
N1207_RS02145 (N1207_02145)	thrD	422185..423549 (-)	1365	WP_043940054.1	aspartate kinase	-
N1207_RS02150 (N1207_02150)	ceuB	423934..424884 (+)	951	WP_260196893.1	petrobactin ABC transporter permease YclN	Machinery gene
N1207_RS02155 (N1207_02155)	yclO	424877..425824 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45709.75 Da
• Isoelectric Point: 4.9618

>NTDB_id=727531 N1207_RS02125 WP_043940053.1 420391..421539(+) (rapC) [Bacillus subtilis strain GL-4]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVFTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=727531 N1207_RS02125 WP_043940053.1 420391..421539(+) (rapC) [Bacillus subtilis strain GL-4]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTTCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568