Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   P3K49_RS04610 Genome accession   NZ_CP119710
Coordinates   968527..969513 (+) Length   328 a.a.
NCBI ID   WP_000959279.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CUVET17-1695     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 963527..974513
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3K49_RS04590 (P3K49_04585) - 963895..965517 (+) 1623 WP_404969049.1 peptide ABC transporter substrate-binding protein -
  P3K49_RS04595 (P3K49_04590) trpS 965637..966626 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  P3K49_RS04600 (P3K49_04595) spxA 966921..967316 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  P3K49_RS04605 (P3K49_04600) mecA 967687..968406 (+) 720 WP_001217731.1 adaptor protein MecA -
  P3K49_RS04610 (P3K49_04605) coiA 968527..969513 (+) 987 WP_000959279.1 competence protein CoiA Machinery gene
  P3K49_RS04615 (P3K49_04610) pepF 969561..971369 (+) 1809 WP_000082727.1 oligoendopeptidase F Regulator
  P3K49_RS04620 (P3K49_04615) yjbH 971829..972635 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  P3K49_RS04625 (P3K49_04620) - 972658..973023 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  P3K49_RS04630 (P3K49_04625) - 973127..973720 (-) 594 WP_000224612.1 CYTH domain-containing protein -
  P3K49_RS04635 (P3K49_04630) - 973906..974253 (+) 348 WP_001242104.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38800.32 Da        Isoelectric Point: 9.4277

>NTDB_id=727429 P3K49_RS04610 WP_000959279.1 968527..969513(+) (coiA) [Staphylococcus aureus strain CUVET17-1695]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPISYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNVKMSELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGESILVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=727429 P3K49_RS04610 WP_000959279.1 968527..969513(+) (coiA) [Staphylococcus aureus strain CUVET17-1695]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTTCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGTCAAAATGAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAGAAAGCATATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCGATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterProScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.037

100

0.96
  coiA Staphylococcus aureus MW2

96.037

100

0.96