Detailed information NTG0727361

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: N2A94_RS08100
• Genome accession: NZ_CP104048
• Coordinates: 1575876..1576919 (-)
• Length: 347 a.a.
• NCBI ID: WP_003103717.1
• Uniprot ID: A0A0E2UQ99
• Organism: Streptococcus parauberis strain KSP20
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1570876..1581919

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N2A94_RS08075 (N2A94_08075)	rimI	1571575..1571991 (-)	417	WP_003105855.1	ribosomal protein S18-alanine N-acetyltransferase	-
N2A94_RS08080 (N2A94_08080)	tsaB	1571996..1572688 (-)	693	WP_304951726.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
N2A94_RS08085 (N2A94_08085)	-	1572961..1573191 (+)	231	WP_003102975.1	DNA-dependent RNA polymerase subunit epsilon	-
N2A94_RS08090 (N2A94_08090)	rnjA	1573193..1574875 (+)	1683	WP_003107714.1	ribonuclease J1	-
N2A94_RS08095 (N2A94_08095)	amiF	1574941..1575876 (-)	936	WP_013794449.1	ABC transporter ATP-binding protein	Regulator
N2A94_RS08100 (N2A94_08100)	oppD	1575876..1576919 (-)	1044	WP_003103717.1	ABC transporter ATP-binding protein	Regulator
N2A94_RS08105 (N2A94_08105)	-	1576934..1577965 (-)	1032	WP_003107717.1	ABC transporter permease	-
N2A94_RS08110 (N2A94_08110)	-	1577975..1578889 (-)	915	WP_004347295.1	ABC transporter permease	-
N2A94_RS08115 (N2A94_08115)	-	1578965..1580623 (-)	1659	WP_013794450.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 38344.10 Da
• Isoelectric Point: 5.1351

>NTDB_id=727361 N2A94_RS08100 WP_003103717.1 1575876..1576919(-) (oppD) [Streptococcus parauberis strain KSP20]
MTKEKVLSVKDLHVDFKTYAGAVKAIRNINFDLYKGETLAIVGESGSGKSVTTRTLMGLNAKNASITGDIDFKGKKLIEL
NEDEWVKVRGKEIAMIFQDPMTSLDPTMKIGMQIAEAILIHENVSKSEALERALKLMNQVGIPNAEEHINDYPHMWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQNQILKLMKGLQSQISSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTDTEEGSLESIPGTPPDLLNPPKGDAFAARNEYALDIDLEEEPPMFKVSDTHYAATWLL
DERAPQVTPPAPILKRWAKWNKKKGQI

Nucleotide

• Length: 1044 bp

>NTDB_id=727361 N2A94_RS08100 WP_003103717.1 1575876..1576919(-) (oppD) [Streptococcus parauberis strain KSP20]
ATGACTAAAGAAAAAGTATTAAGTGTCAAAGACCTCCATGTTGATTTTAAAACATATGCTGGAGCTGTTAAGGCAATCCG
TAATATCAATTTTGATTTATATAAAGGTGAGACACTAGCCATTGTTGGTGAATCAGGTTCTGGTAAATCCGTTACGACAC
GGACTTTGATGGGGCTAAACGCTAAGAATGCAAGTATCACTGGAGATATTGATTTCAAAGGTAAGAAATTAATTGAGCTT
AATGAAGACGAATGGGTTAAAGTTCGTGGTAAAGAAATTGCCATGATTTTCCAAGATCCCATGACAAGTCTTGACCCTAC
AATGAAAATTGGCATGCAGATTGCAGAAGCGATTCTAATCCATGAAAATGTTTCTAAAAGTGAAGCTTTGGAACGTGCAT
TGAAATTGATGAATCAAGTTGGGATTCCAAATGCGGAAGAACATATCAATGATTATCCACATATGTGGTCTGGTGGTATG
CGTCAACGTGCTGTCATTGCTATTGCACTTGCTGCAAATCCAGAAATTTTAATTGCTGACGAACCTACAACTGCCCTAGA
CGTAACAATTCAGAACCAAATTTTGAAATTGATGAAAGGTTTGCAATCACAAATTTCTTCATCAATTATCTTTATCACCC
ATGACCTTGGGGTTGTGGCTGGTATGGCTGATCGTGTAGCTGTTATGTATGCAGGTAAAATTGTTGAATATGGTACAGTA
GATGAAGTTTTCTATAATCCACAACATCCCTACACATGGGGCCTTTTGAACTCTATGCCTACAACTGATACCGAAGAAGG
AAGCCTTGAATCTATTCCAGGGACACCTCCTGACCTGTTGAATCCTCCAAAAGGAGATGCCTTTGCTGCTCGTAATGAGT
ATGCCTTAGATATCGACTTGGAAGAGGAACCTCCTATGTTTAAAGTTTCTGATACACATTACGCTGCAACATGGTTGTTA
GATGAACGTGCACCACAAGTAACACCACCTGCACCAATTTTAAAACGTTGGGCTAAATGGAATAAGAAGAAAGGACAAAT
TTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (27-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

3D structure

• AlphaFold DB: A0A0E2UQ99

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	77.746	99.712	0.775
amiE	Streptococcus salivarius strain HSISS4	56.083	97.118	0.545
amiE	Streptococcus thermophilus LMG 18311	55.786	97.118	0.542
amiE	Streptococcus thermophilus LMD-9	55.786	97.118	0.542