Detailed information NTG0727319

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: N2A96_RS09235
• Genome accession: NZ_CP104047
• Coordinates: 1823785..1824828 (-)
• Length: 347 a.a.
• NCBI ID: WP_003103717.1
• Uniprot ID: A0A0E2UQ99
• Organism: Streptococcus parauberis strain KSP10
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1818785..1829828

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N2A96_RS09210 (N2A96_09210)	rimI	1819484..1819900 (-)	417	WP_003105855.1	ribosomal protein S18-alanine N-acetyltransferase	-
N2A96_RS09215 (N2A96_09215)	tsaB	1819905..1820597 (-)	693	WP_311201944.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
N2A96_RS09220 (N2A96_09220)	-	1820870..1821100 (+)	231	WP_003102975.1	DNA-dependent RNA polymerase subunit epsilon	-
N2A96_RS09225 (N2A96_09225)	rnjA	1821102..1822784 (+)	1683	WP_260003343.1	ribonuclease J1	-
N2A96_RS09230 (N2A96_09230)	amiF	1822850..1823785 (-)	936	WP_037622068.1	ABC transporter ATP-binding protein	Regulator
N2A96_RS09235 (N2A96_09235)	oppD	1823785..1824828 (-)	1044	WP_003103717.1	ABC transporter ATP-binding protein	Regulator
N2A96_RS09240 (N2A96_09240)	-	1824843..1825874 (-)	1032	WP_003107717.1	ABC transporter permease	-
N2A96_RS09245 (N2A96_09245)	-	1825884..1826798 (-)	915	WP_003103193.1	ABC transporter permease	-
N2A96_RS09250 (N2A96_09250)	-	1826874..1828532 (-)	1659	WP_003107719.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 38344.10 Da
• Isoelectric Point: 5.1351

>NTDB_id=727319 N2A96_RS09235 WP_003103717.1 1823785..1824828(-) (oppD) [Streptococcus parauberis strain KSP10]
MTKEKVLSVKDLHVDFKTYAGAVKAIRNINFDLYKGETLAIVGESGSGKSVTTRTLMGLNAKNASITGDIDFKGKKLIEL
NEDEWVKVRGKEIAMIFQDPMTSLDPTMKIGMQIAEAILIHENVSKSEALERALKLMNQVGIPNAEEHINDYPHMWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQNQILKLMKGLQSQISSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTDTEEGSLESIPGTPPDLLNPPKGDAFAARNEYALDIDLEEEPPMFKVSDTHYAATWLL
DERAPQVTPPAPILKRWAKWNKKKGQI

Nucleotide

• Length: 1044 bp

>NTDB_id=727319 N2A96_RS09235 WP_003103717.1 1823785..1824828(-) (oppD) [Streptococcus parauberis strain KSP10]
ATGACTAAAGAAAAAGTATTAAGTGTCAAAGACCTCCATGTTGATTTTAAAACATATGCTGGAGCTGTTAAGGCAATCCG
TAATATCAATTTTGATTTATATAAAGGTGAGACACTAGCCATTGTTGGTGAATCAGGTTCTGGTAAATCCGTTACGACAC
GGACTTTGATGGGGCTAAACGCTAAGAATGCAAGTATCACTGGAGATATTGATTTCAAAGGTAAGAAATTAATTGAGCTT
AATGAAGACGAATGGGTTAAAGTTCGTGGTAAAGAAATTGCCATGATTTTCCAAGATCCCATGACAAGTCTTGACCCTAC
AATGAAAATTGGCATGCAGATTGCAGAAGCGATTCTAATCCATGAAAATGTTTCTAAAAGTGAAGCTTTGGAACGTGCAT
TGAAATTGATGAATCAAGTTGGGATTCCAAATGCGGAAGAACATATCAATGATTATCCACATATGTGGTCTGGTGGTATG
CGTCAACGTGCTGTCATTGCTATTGCACTTGCTGCAAATCCAGAAATTTTAATTGCTGACGAACCTACAACTGCCCTAGA
CGTAACAATTCAGAACCAAATTTTGAAATTGATGAAAGGTTTGCAATCACAAATTTCTTCATCAATTATCTTTATCACCC
ATGACCTTGGGGTTGTGGCTGGTATGGCTGATCGTGTAGCTGTTATGTATGCAGGTAAAATTGTTGAATATGGTACAGTA
GATGAAGTTTTCTATAATCCACAACATCCCTACACATGGGGCCTTTTGAACTCTATGCCTACAACTGATACCGAAGAAGG
AAGCCTTGAATCTATTCCAGGGACACCTCCTGACCTGTTGAATCCTCCAAAAGGAGATGCCTTTGCTGCTCGTAATGAGT
ATGCCTTAGATATCGACTTGGAAGAGGAACCTCCTATGTTTAAAGTTTCTGATACACATTACGCTGCAACATGGTTGTTA
GATGAACGTGCACCACAAGTAACACCACCTGCACCAATTTTAAAACGTTGGGCTAAATGGAATAAGAAGAAAGGACAAAT
TTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (27-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

3D structure

• AlphaFold DB: A0A0E2UQ99

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	77.746	99.712	0.775
amiE	Streptococcus salivarius strain HSISS4	56.083	97.118	0.545
amiE	Streptococcus thermophilus LMG 18311	55.786	97.118	0.542
amiE	Streptococcus thermophilus LMD-9	55.786	97.118	0.542