Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   N0J69_RS02170 Genome accession   NZ_CP104020
Coordinates   407720..408406 (+) Length   228 a.a.
NCBI ID   WP_001792568.1    Uniprot ID   A0A133PXY3
Organism   Staphylococcus aureus strain 0831     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 402720..413406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N0J69_RS02135 yqeH 403247..404347 (+) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -
  N0J69_RS02140 aroE 404361..405167 (+) 807 WP_000666761.1 shikimate dehydrogenase -
  N0J69_RS02145 yhbY 405171..405461 (+) 291 WP_000955231.1 ribosome assembly RNA-binding protein YhbY -
  N0J69_RS02150 nadD 405464..406033 (+) 570 WP_000725162.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  N0J69_RS02155 yqeK 406023..406607 (+) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  N0J69_RS02160 rsfS 406608..406961 (+) 354 WP_001088022.1 ribosome silencing factor -
  N0J69_RS02165 - 406964..407680 (+) 717 WP_000084829.1 class I SAM-dependent methyltransferase -
  N0J69_RS02170 comEA 407720..408406 (+) 687 WP_001792568.1 ComEA family DNA-binding protein Machinery gene
  N0J69_RS02175 - 408498..408959 (+) 462 WP_000439693.1 ComE operon protein 2 -
  N0J69_RS02180 comEC 408964..411165 (+) 2202 WP_001548978.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  N0J69_RS02185 holA 411222..412196 (+) 975 WP_001282562.1 DNA polymerase III subunit delta -
  N0J69_RS02190 rpsT 412241..412492 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25863.49 Da        Isoelectric Point: 9.3305

>NTDB_id=727047 N0J69_RS02170 WP_001792568.1 407720..408406(+) (comEA) [Staphylococcus aureus strain 0831]
MVLLYQFLLRYKDFLTQWKLYILSAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=727047 N0J69_RS02170 WP_001792568.1 407720..408406(+) (comEA) [Staphylococcus aureus strain 0831]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTCTAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGAAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A133PXY3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

98.238

99.561

0.978
  comEA Staphylococcus aureus N315

97.357

99.561

0.969