Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   P1J77_RS00820 Genome accession   NZ_CP119597
Coordinates   170339..171373 (+) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain 1039     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 165339..176373
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P1J77_RS00790 (P1J77_00790) tsaE 166413..166874 (+) 462 WP_136278107.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  P1J77_RS00795 (P1J77_00795) - 166849..167373 (+) 525 WP_009880752.1 N-acetyltransferase -
  P1J77_RS00800 (P1J77_00800) - 167382..168656 (+) 1275 WP_010922584.1 LCP family protein -
  P1J77_RS00805 (P1J77_00805) - 168767..169123 (-) 357 WP_002988657.1 hypothetical protein -
  P1J77_RS00810 (P1J77_00810) - 169120..169539 (-) 420 WP_002983376.1 HIT family protein -
  P1J77_RS00815 (P1J77_00815) pptA 169611..170336 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  P1J77_RS00820 (P1J77_00820) pptB 170339..171373 (+) 1035 WP_010922583.1 ABC transporter permease Regulator
  P1J77_RS00825 (P1J77_00825) - 171437..172228 (+) 792 WP_002983385.1 phosphotransferase family protein -
  P1J77_RS00830 (P1J77_00830) trmB 172228..172863 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  P1J77_RS00840 (P1J77_00840) rimP 173122..173658 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  P1J77_RS00845 (P1J77_00845) nusA 173833..174990 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  P1J77_RS00850 (P1J77_00850) - 175006..175302 (+) 297 WP_002983486.1 YlxR family protein -
  P1J77_RS00855 (P1J77_00855) - 175295..175597 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=726952 P1J77_RS00820 WP_010922583.1 170339..171373(+) (pptB) [Streptococcus pyogenes strain 1039]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=726952 P1J77_RS00820 WP_010922583.1 170339..171373(+) (pptB) [Streptococcus pyogenes strain 1039]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGCCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCCCTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427