Detailed information NTG0726707

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: P1I87_RS11465
• Genome accession: NZ_CP119576
• Coordinates: 2242311..2243420 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264863.1
• Uniprot ID: Q8DWQ8
• Organism: Streptococcus agalactiae strain Guangzhou-SAG092
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2237311..2248420

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P1I87_RS11440 (P1I87_11440)	-	2237683..2238522 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
P1I87_RS11445 (P1I87_11445)	pgsA	2238522..2239064 (-)	543	WP_000976003.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
P1I87_RS11450 (P1I87_11450)	-	2239187..2240470 (-)	1284	WP_000217754.1	pitrilysin family protein	-
P1I87_RS11455 (P1I87_11455)	-	2240472..2241716 (-)	1245	WP_000706188.1	pitrilysin family protein	-
P1I87_RS11460 (P1I87_11460)	yaaA	2241955..2242308 (+)	354	WP_000384871.1	S4 domain-containing protein YaaA	-
P1I87_RS11465 (P1I87_11465)	recF	2242311..2243420 (+)	1110	WP_000264863.1	DNA replication/repair protein RecF	Machinery gene
P1I87_RS11470 (P1I87_11470)	-	2243432..2244298 (-)	867	WP_000398683.1	GRP family sugar transporter	-
P1I87_RS11475 (P1I87_11475)	-	2244354..2245016 (-)	663	WP_001865840.1	helix-turn-helix transcriptional regulator	-
P1I87_RS11480 (P1I87_11480)	guaB	2245091..2246572 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
P1I87_RS11485 (P1I87_11485)	-	2246729..2247214 (-)	486	WP_001034427.1	arginine repressor	-
P1I87_RS11490 (P1I87_11490)	-	2247224..2247904 (-)	681	WP_000628851.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42526.35 Da
• Isoelectric Point: 7.3132

>NTDB_id=726707 P1I87_RS11465 WP_000264863.1 2242311..2243420(+) (recF) [Streptococcus agalactiae strain Guangzhou-SAG092]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LNLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLTVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFASQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=726707 P1I87_RS11465 WP_000264863.1 2242311..2243420(+) (recF) [Streptococcus agalactiae strain Guangzhou-SAG092]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCACCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGTGGCCAT
CTTAACTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAAGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGTCTAAGACGAAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTAACAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGCTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q8DWQ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.085	98.374	0.621
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444