Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   NZD48_RS01120 Genome accession   NZ_CP103964
Coordinates   244861..245772 (+) Length   303 a.a.
NCBI ID   WP_252537186.1    Uniprot ID   -
Organism   Staphylococcus hyicus strain MM2101     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 239861..250772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NZD48_RS01090 (NZD48_01090) - 240465..241379 (+) 915 WP_252537179.1 ABC transporter ATP-binding protein -
  NZD48_RS01095 (NZD48_01095) - 241372..241794 (+) 423 WP_259489576.1 hypothetical protein -
  NZD48_RS01100 (NZD48_01100) - 241863..242123 (+) 261 WP_259489577.1 hypothetical protein -
  NZD48_RS01105 (NZD48_01105) - 242140..243057 (+) 918 WP_259489578.1 sensor histidine kinase KdpD -
  NZD48_RS01110 (NZD48_01110) - 243621..244058 (-) 438 WP_209260594.1 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein -
  NZD48_RS01115 (NZD48_01115) braR 244187..244852 (+) 666 WP_259489579.1 response regulator transcription factor Regulator
  NZD48_RS01120 (NZD48_01120) braS 244861..245772 (+) 912 WP_252537186.1 sensor histidine kinase Regulator
  NZD48_RS01125 (NZD48_01125) - 245863..246612 (+) 750 WP_119635081.1 ABC transporter ATP-binding protein -
  NZD48_RS01130 (NZD48_01130) - 246614..248575 (+) 1962 WP_259489581.1 ABC transporter permease -
  NZD48_RS01135 (NZD48_01135) - 248817..249443 (-) 627 WP_252537192.1 FMN-dependent NADH-azoreductase -
  NZD48_RS01140 (NZD48_01140) spn 249684..250004 (-) 321 WP_252548618.1 SPIN family peroxidase inhibitor -

Sequence

Protein


Download         Length: 303 a.a.        Molecular weight: 35429.29 Da        Isoelectric Point: 7.6256

>NTDB_id=726636 NZD48_RS01120 WP_252537186.1 244861..245772(+) (braS) [Staphylococcus hyicus strain MM2101]
MCVRFYNHILSDVCIYVLMLMLFLFISLIYDFETEAYILTLSVSLFVFSLYIIVKWAYFKKQETLKQTNDRLASELQHVK
MMHRDYQRDLEHYFLTWVHQIKTPITASKLLLERNEAGMVNRVRQEITEIENYTNLALNYLKLLSHETDMVVQKVALDDI
VKPLIQRYALHFIEHRTRIHTEHLHCTVTTDAQWTKIMIEQILNNALKYAKGGDIWIEFDAHKQQLTIKDNGMGISKADL
PKIFEKGYSGTNGRLNDKSSGIGLFIVKEISEKLQHPITVQSELGVLTQFTIQFPKTSHLTIM

Nucleotide


Download         Length: 912 bp        

>NTDB_id=726636 NZD48_RS01120 WP_252537186.1 244861..245772(+) (braS) [Staphylococcus hyicus strain MM2101]
ATGTGTGTGCGCTTTTATAACCATATTTTAAGTGATGTTTGTATTTATGTACTCATGTTAATGTTGTTTTTATTTATATC
ATTAATCTATGACTTCGAAACGGAAGCCTATATTTTAACGTTATCCGTATCACTTTTTGTGTTTAGTCTGTATATTATAG
TGAAGTGGGCTTATTTTAAAAAACAAGAAACATTAAAACAAACTAATGACCGTTTGGCATCTGAATTGCAACACGTAAAA
ATGATGCATCGTGACTATCAACGAGATTTGGAACATTACTTTTTAACTTGGGTGCATCAAATTAAAACACCGATTACTGC
ATCCAAACTCTTGTTAGAGCGTAATGAAGCGGGGATGGTAAATCGCGTGCGTCAAGAAATTACAGAAATTGAGAATTATA
CGAATTTGGCGTTGAATTATTTAAAACTATTAAGTCATGAAACCGATATGGTTGTTCAAAAAGTCGCACTTGATGACATC
GTGAAACCGCTCATTCAACGTTATGCGTTACATTTTATTGAACATCGCACACGCATTCATACTGAACATTTACATTGTAC
GGTCACTACAGATGCACAATGGACTAAAATTATGATTGAACAAATTTTAAACAATGCTCTGAAATATGCGAAAGGTGGAG
ACATCTGGATTGAGTTTGATGCACACAAACAACAACTCACCATTAAAGATAATGGTATGGGGATTAGTAAAGCAGATTTA
CCCAAAATATTTGAAAAAGGATATTCTGGGACGAACGGGCGCCTAAATGACAAATCTAGCGGGATAGGATTGTTTATCGT
GAAAGAAATTTCAGAGAAACTTCAGCACCCGATTACCGTTCAATCAGAATTAGGCGTTTTAACACAATTTACGATTCAGT
TCCCTAAAACGTCTCATCTTACAATTATGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(195-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

50.515

96.04

0.485