Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   NZD48_RS01115 Genome accession   NZ_CP103964
Coordinates   244187..244852 (+) Length   221 a.a.
NCBI ID   WP_259489579.1    Uniprot ID   -
Organism   Staphylococcus hyicus strain MM2101     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 239187..249852
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NZD48_RS01085 (NZD48_01085) - 239714..240382 (+) 669 WP_252537177.1 response regulator transcription factor -
  NZD48_RS01090 (NZD48_01090) - 240465..241379 (+) 915 WP_252537179.1 ABC transporter ATP-binding protein -
  NZD48_RS01095 (NZD48_01095) - 241372..241794 (+) 423 WP_259489576.1 hypothetical protein -
  NZD48_RS01100 (NZD48_01100) - 241863..242123 (+) 261 WP_259489577.1 hypothetical protein -
  NZD48_RS01105 (NZD48_01105) - 242140..243057 (+) 918 WP_259489578.1 sensor histidine kinase KdpD -
  NZD48_RS01110 (NZD48_01110) - 243621..244058 (-) 438 WP_209260594.1 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein -
  NZD48_RS01115 (NZD48_01115) braR 244187..244852 (+) 666 WP_259489579.1 response regulator transcription factor Regulator
  NZD48_RS01120 (NZD48_01120) braS 244861..245772 (+) 912 WP_252537186.1 sensor histidine kinase Regulator
  NZD48_RS01125 (NZD48_01125) - 245863..246612 (+) 750 WP_119635081.1 ABC transporter ATP-binding protein -
  NZD48_RS01130 (NZD48_01130) - 246614..248575 (+) 1962 WP_259489581.1 ABC transporter permease -
  NZD48_RS01135 (NZD48_01135) - 248817..249443 (-) 627 WP_252537192.1 FMN-dependent NADH-azoreductase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25866.07 Da        Isoelectric Point: 6.6922

>NTDB_id=726635 NZD48_RS01115 WP_259489579.1 244187..244852(+) (braR) [Staphylococcus hyicus strain MM2101]
MKIMIVEDDFTIAESLVKELQKWNHEAVNVQDYYHITEKFQTLQPHLVLLDINLPHLNGFHWCQEIRQKSQVPIMFISSA
SDNMNQMMAIQMGADDFIEKPFNLKLTIMKIQALLRRSYDFKVEQSQLHVKGCALVVDKALLIYQDQTLSLTLTELQILQ
QLFINEGHFVNRNTLIEHCWQSENFIDDNTLAVNMSRIRKKLKEIGLVDFIQTKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=726635 NZD48_RS01115 WP_259489579.1 244187..244852(+) (braR) [Staphylococcus hyicus strain MM2101]
ATGAAGATTATGATTGTTGAGGATGATTTTACAATTGCAGAAAGTTTAGTCAAAGAACTTCAAAAATGGAATCACGAAGC
GGTAAATGTGCAAGATTATTATCATATAACTGAAAAATTCCAAACGCTTCAACCTCACCTCGTTCTTTTAGATATCAACC
TTCCACATCTTAATGGCTTTCATTGGTGTCAGGAAATACGGCAAAAATCTCAAGTACCTATTATGTTTATTAGTTCGGCT
TCGGATAATATGAATCAAATGATGGCCATCCAAATGGGGGCTGATGATTTTATAGAAAAGCCGTTTAATTTAAAGTTAAC
AATTATGAAAATTCAAGCGCTATTGAGGCGATCCTATGACTTTAAAGTGGAACAATCTCAGTTACACGTAAAAGGGTGTG
CGTTAGTTGTTGATAAAGCTTTATTGATATATCAAGATCAAACGCTGTCGCTAACGCTAACAGAGTTACAAATTTTACAA
CAATTATTTATAAATGAAGGACATTTTGTGAATCGTAATACATTAATTGAGCACTGTTGGCAATCTGAAAATTTCATTGA
TGACAATACCTTAGCAGTAAATATGTCTCGTATACGTAAGAAGTTAAAAGAAATCGGTTTAGTGGATTTTATACAAACGA
AAAAGAATGTAGGATACAAAGTATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-105)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

67.421

100

0.674