Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   NYR32_RS08350 Genome accession   NZ_CP103912
Coordinates   1787187..1788464 (-) Length   425 a.a.
NCBI ID   WP_259600162.1    Uniprot ID   -
Organism   Lactiplantibacillus plantarum strain SRCM210797     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1782187..1793464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYR32_RS08345 (NYR32_08345) - 1785438..1787147 (-) 1710 WP_003640732.1 proline--tRNA ligase -
  NYR32_RS08350 (NYR32_08350) eeP 1787187..1788464 (-) 1278 WP_259600162.1 RIP metalloprotease RseP Regulator
  NYR32_RS08355 (NYR32_08355) - 1788502..1789287 (-) 786 WP_003640734.1 phosphatidate cytidylyltransferase -
  NYR32_RS08360 (NYR32_08360) - 1789303..1790082 (-) 780 WP_046039550.1 isoprenyl transferase -
  NYR32_RS08365 (NYR32_08365) frr 1790202..1790765 (-) 564 WP_160230929.1 ribosome recycling factor -
  NYR32_RS08370 (NYR32_08370) pyrH 1790767..1791489 (-) 723 WP_003640737.1 UMP kinase -
  NYR32_RS08375 (NYR32_08375) tsf 1791689..1792567 (-) 879 WP_003644498.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 45868.40 Da        Isoelectric Point: 9.7123

>NTDB_id=726547 NYR32_RS08350 WP_259600162.1 1787187..1788464(-) (eeP) [Lactiplantibacillus plantarum strain SRCM210797]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGPDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKHYAVNHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTADSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLTLTINRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQVAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=726547 NYR32_RS08350 WP_259600162.1 1787187..1788464(-) (eeP) [Lactiplantibacillus plantarum strain SRCM210797]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTTTACTTTGC
CAAAAAGGCTGGGATTCTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCAACAA
CTTATACGTTACGGTTTCTGCCAATCGGTGGTTACGTACGGATGGCCGGTGTGGCCGATGATGAAGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTGCAAATTGGTCCGGATGGGATTGTTCATTCAATCAATGCTAGTAAGAAGACAACGTTGTT
CAATGGAATTCCACTGTCAGTGACGGCGACTGATCTCGAAAAAGAACTCTGGATCGAAGGTTATGAGAACGGGGACGAAA
GTGAAGTTAAACACTACGCCGTCAATCATGACGCTACGATCGTTGAAAGCGATGGTACCGAAGTTCAAATTGCACCGGTC
GACGTCCAATTTCAATCGGCCAAGTTATGGCAACGAATGTTGACGAATTTTGCCGGACCGATGAATAACTTCATTTTGGC
CATCATTACATTTGCAATTCTTGCCTTTATGCAGGGTGGTGTTACGAGTACAACGACCCACGTAGCGGCGACGACAGCAG
ACTCAGTTGCCCGTACGGCCGGTATTCAAAAGGGCGATCAAATCGTGGCGGTTAACGGTAAAAAAATGACGAGTGCCCAA
TCGATTTCGCTGTTGATTCAAGACAGCCCGAAGCAACGGTTGACTTTGACCATCAACCGGGCCGGTCAGACTAAAAAAAT
TGCGGTTACCCCTGCTGCCAAGACGGTCTCTGGTAATCGAATCGGTCAAATCGGGGTCCAATGGGCGACTAAGACCGACA
CGAGTCTGGGGGCCAAGTTAGCATACGGCTTTACTGGTTCGTGGGGAATTACCAAACAGATTTTTCAAGTGCTTGGTCGG
ATGGTCACTCACGGGTTCAGTTTGAATGATTTAGGTGGGCCGGTGGCAATCTTTGCCACGACCTCGCAAGTCGCTAAGTC
CGGGGTACGCACGGTGATTTATTTGCTCGCCGTGCTGTCGATCAACCTTGGAATTGTTAATTTATTACCGATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCCTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAGCGATATTTCTTCTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(210-260)

Peptidase family M50 (Peptidase_M50)

(7-411)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.364

100

0.487
  eeP Streptococcus thermophilus LMD-9

48.364

100

0.487