Detailed information NTG0726432

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PWR57_RS00265
• Genome accession: NZ_CP119441
• Coordinates: 44636..45661 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli O121 strain 201805972
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 39636..50661

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PWR57_RS00235 (PWR57_00235)	zapB	39720..39965 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
PWR57_RS00240 (PWR57_00240)	rraA	40050..40535 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PWR57_RS00245 (PWR57_00245)	menA	40628..41554 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PWR57_RS00250 (PWR57_00250)	hslU	41621..42952 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
PWR57_RS00255 (PWR57_00255)	hslV	42962..43492 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PWR57_RS00260 (PWR57_00260)	ftsN	43585..44544 (-)	960	WP_073860315.1	cell division protein FtsN	-
PWR57_RS00265 (PWR57_00265)	cytR	44636..45661 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PWR57_RS00270 (PWR57_00270)	priA	45817..48015 (-)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
PWR57_RS00275 (PWR57_00275)	rpmE	48218..48430 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
PWR57_RS00280 (PWR57_00280)	rhsC	48590..50092 (+)	1503	Protein_55	rhs element protein RhsC	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=726432 PWR57_RS00265 WP_000644904.1 44636..45661(-) (cytR) [Escherichia coli O121 strain 201805972]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=726432 PWR57_RS00265 WP_000644904.1 44636..45661(-) (cytR) [Escherichia coli O121 strain 201805972]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628