Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   NX081_RS01800 Genome accession   NZ_CP103856
Coordinates   339901..340299 (-) Length   132 a.a.
NCBI ID   WP_060563061.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM116265     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 334901..345299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX081_RS01775 (NX081_01775) - 335072..336274 (+) 1203 WP_060563058.1 GTP-binding protein -
  NX081_RS01780 (NX081_01780) - 336339..337475 (+) 1137 WP_052827030.1 zinc-dependent alcohol dehydrogenase -
  NX081_RS01785 (NX081_01785) - 337490..337924 (+) 435 WP_007409358.1 RDD family protein -
  NX081_RS01790 (NX081_01790) - 337996..338319 (+) 324 WP_060563059.1 YckD family protein -
  NX081_RS01795 (NX081_01795) - 338424..339860 (+) 1437 WP_060563060.1 glycoside hydrolase family 1 protein -
  NX081_RS01800 (NX081_01800) nin/comJ 339901..340299 (-) 399 WP_060563061.1 competence protein ComJ Regulator
  NX081_RS01805 (NX081_01805) nucA/comI 340320..340757 (-) 438 WP_060563062.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  NX081_RS01810 (NX081_01810) hxlB 341116..341673 (-) 558 WP_007409354.1 6-phospho-3-hexuloisomerase -
  NX081_RS01815 (NX081_01815) hxlA 341670..342305 (-) 636 WP_060563063.1 3-hexulose-6-phosphate synthase -
  NX081_RS01820 (NX081_01820) - 342537..342899 (+) 363 WP_007409352.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14894.84 Da        Isoelectric Point: 4.7846

>NTDB_id=726055 NX081_RS01800 WP_060563061.1 339901..340299(-) (nin/comJ) [Bacillus velezensis strain SRCM116265]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=726055 NX081_RS01800 WP_060563061.1 339901..340299(-) (nin/comJ) [Bacillus velezensis strain SRCM116265]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.758

100

0.758