Detailed information NTG0725752

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: NYR86_RS05890
• Genome accession: NZ_CP103830
• Coordinates: 1325495..1326625 (-)
• Length: 376 a.a.
• NCBI ID: WP_039197470.1
• Uniprot ID: -
• Organism: Actinobacillus equuli subsp. equuli strain 2499
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	1311920..1325443	1325495..1326625	flank	52

Gene organization within MGE regions

Location: 1311920..1326625

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYR86_RS05800 (NYR86_05800)	-	1311920..1312441 (-)	522	WP_279439257.1	hypothetical protein	-
NYR86_RS05805 (NYR86_05805)	-	1312423..1313109 (-)	687	WP_039197447.1	hypothetical protein	-
NYR86_RS05810 (NYR86_05810)	-	1313248..1315833 (+)	2586	WP_279622987.1	penicillin-binding protein 1A	-
NYR86_RS05815 (NYR86_05815)	aroK	1316097..1316618 (+)	522	WP_005623982.1	shikimate kinase AroK	-
NYR86_RS05820 (NYR86_05820)	aroB	1316635..1317723 (+)	1089	WP_279622988.1	3-dehydroquinate synthase	-
NYR86_RS05825 (NYR86_05825)	-	1317727..1318563 (+)	837	WP_039197452.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	-
NYR86_RS05830 (NYR86_05830)	-	1318633..1319991 (+)	1359	WP_278225881.1	sodium-dependent transporter	-
NYR86_RS05835 (NYR86_05835)	pgi	1320119..1321759 (-)	1641	WP_279622989.1	glucose-6-phosphate isomerase	-
NYR86_RS05840 (NYR86_05840)	-	1321798..1322049 (-)	252	WP_039197458.1	accessory factor UbiK family protein	-
NYR86_RS05865 (NYR86_05865)	aroE	1322768..1323592 (-)	825	WP_279622990.1	shikimate dehydrogenase	-
NYR86_RS05870 (NYR86_05870)	-	1323598..1324152 (-)	555	WP_275217136.1	Sua5/YciO/YrdC/YwlC family protein	-
NYR86_RS05875 (NYR86_05875)	-	1324145..1324678 (-)	534	WP_039197464.1	type I DNA topoisomerase	-
NYR86_RS05880 (NYR86_05880)	yqfB	1324678..1324983 (-)	306	WP_279622991.1	N(4)-acetylcytidine aminohydrolase	-
NYR86_RS05885 (NYR86_05885)	recX	1324976..1325431 (-)	456	WP_237610172.1	recombination regulator RecX	-
NYR86_RS05890 (NYR86_05890)	recA	1325495..1326625 (-)	1131	WP_039197470.1	recombinase RecA	Machinery gene

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 40560.21 Da
• Isoelectric Point: 4.5881

>NTDB_id=725752 NYR86_RS05890 WP_039197470.1 1325495..1326625(-) (recA) [Actinobacillus equuli subsp. equuli strain 2499]
MAADNKKAQKNTVTKQIDPEQKEKALAAALAQIEKQFGKGSIMRLGDTQALDIEAVSTGSIGLDAALGIGGLPMGRIVEI
YGPESSGKTTLTLSVIAQAQKSGKTCAFIDAEHALDPVYARKLGVDTDALLISQPDNGEQALEICDALVRSGAVDVIIVD
SVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKATNCLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLD
IRRSGVVKDGDEVVGSETKVKIVKNKVAPPFREVQFDIMYGEGISRMNELLILAEANGFIQKAGAWFSYEGTKIGQGKNN
AIKWLKENAEIANKIEQEIRELLISTPEKTSAGEQNVLDADDVNDFEDEEFNEEEL

Nucleotide

• Length: 1131 bp

>NTDB_id=725752 NYR86_RS05890 WP_039197470.1 1325495..1326625(-) (recA) [Actinobacillus equuli subsp. equuli strain 2499]
ATGGCAGCTGACAACAAAAAAGCGCAAAAGAATACAGTAACAAAACAAATCGATCCGGAACAAAAAGAAAAAGCATTAGC
AGCTGCTCTTGCCCAAATTGAAAAACAATTTGGTAAAGGATCTATCATGCGCTTAGGTGATACACAAGCGCTTGATATTG
AAGCGGTTTCAACCGGTTCAATCGGTTTAGATGCCGCATTAGGTATCGGCGGTTTACCGATGGGACGTATCGTTGAGATC
TATGGCCCGGAATCTTCAGGTAAAACAACACTGACTTTATCGGTCATTGCGCAAGCACAAAAATCAGGTAAAACTTGTGC
ATTTATTGATGCGGAACACGCACTTGATCCGGTTTATGCACGCAAATTAGGCGTGGATACCGATGCATTATTGATTTCTC
AGCCGGATAACGGTGAGCAAGCGCTTGAGATTTGTGATGCGTTAGTTCGCTCCGGTGCGGTTGATGTGATTATTGTGGAC
TCGGTTGCTGCATTAACGCCGAAAGCGGAAATTGAAGGTGATATGGGCGATTCTCATATGGGCTTACAAGCACGTTTAAT
GTCACAAGCATTACGTAAGTTAACCGCAAATATTAAGGCGACTAACTGCTTAGTGGTGTTTATCAACCAAATTCGTATGA
AGATCGGTGTGATGTTCGGTAACCCGGAAACAACAACCGGCGGTAATGCACTTAAATTCTACGCTTCGGTTCGTTTAGAT
ATCCGCCGTTCAGGTGTAGTAAAAGACGGTGATGAAGTGGTTGGTAGCGAAACGAAAGTGAAAATTGTGAAAAATAAAGT
TGCGCCGCCGTTCCGTGAAGTTCAATTTGACATTATGTATGGCGAAGGGATTTCACGTATGAATGAACTATTGATCCTTG
CTGAAGCGAATGGCTTTATTCAAAAAGCGGGTGCTTGGTTCTCATACGAAGGTACGAAAATCGGCCAAGGTAAAAATAAT
GCAATTAAATGGTTAAAAGAGAACGCAGAGATTGCAAACAAAATTGAACAAGAAATTCGTGAGTTACTCATTTCAACACC
GGAAAAAACATCAGCAGGCGAGCAGAATGTATTAGATGCCGATGATGTGAATGACTTTGAAGACGAAGAGTTTAACGAAG
AAGAACTATAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (24-285)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Glaesserella parasuis strain SC1401	84.085	100	0.843
recA	Pseudomonas stutzeri DSM 10701	71.802	91.489	0.657
recA	Vibrio cholerae strain A1552	71.221	91.489	0.652
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.221	91.489	0.652
recA	Acinetobacter baylyi ADP1	72.404	89.628	0.649
recA	Acinetobacter baumannii D1279779	74.618	86.968	0.649
recA	Neisseria gonorrhoeae MS11	70.988	86.17	0.612
recA	Neisseria gonorrhoeae MS11	70.988	86.17	0.612
recA	Neisseria gonorrhoeae strain FA1090	70.988	86.17	0.612
recA	Ralstonia pseudosolanacearum GMI1000	71.746	83.777	0.601
recA	Streptococcus mutans UA159	56.736	100	0.582
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.848	87.766	0.569
recA	Streptococcus mitis SK321	58.038	97.606	0.566
recA	Streptococcus mitis NCTC 12261	60.882	90.426	0.551
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.677	88.83	0.548
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.975	85.638	0.548
recA	Bacillus subtilis subsp. subtilis str. 168	63.75	85.106	0.543
recA	Streptococcus pneumoniae TIGR4	62.346	86.17	0.537
recA	Streptococcus pneumoniae D39	62.346	86.17	0.537
recA	Streptococcus pneumoniae R6	62.346	86.17	0.537
recA	Streptococcus pneumoniae Rx1	62.346	86.17	0.537
recA	Helicobacter pylori strain NCTC11637	61.212	87.766	0.537
recA	Streptococcus pyogenes NZ131	59.118	90.426	0.535
recA	Helicobacter pylori 26695	60.909	87.766	0.535
recA	Lactococcus lactis subsp. cremoris KW2	57.018	90.957	0.519
recA	Latilactobacillus sakei subsp. sakei 23K	57.944	85.372	0.495