Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   A6P39_RS19775 Genome accession   NZ_CP119133
Coordinates   4450379..4451503 (+) Length   374 a.a.
NCBI ID   WP_067052714.1    Uniprot ID   -
Organism   Streptomyces sp. FXJ1.172     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4445379..4456503
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6P39_RS19760 (A6P39_019770) - 4446046..4446906 (+) 861 WP_199840948.1 hypothetical protein -
  A6P39_RS19765 (A6P39_019775) - 4446958..4448670 (-) 1713 WP_067052710.1 sigma-70 family RNA polymerase sigma factor -
  A6P39_RS19770 (A6P39_019780) radA/sms 4448889..4450298 (+) 1410 WP_067052712.1 DNA repair protein RadA Machinery gene
  A6P39_RS19775 (A6P39_019785) disA 4450379..4451503 (+) 1125 WP_067052714.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  A6P39_RS19780 (A6P39_019790) - 4451560..4452381 (-) 822 WP_199840949.1 hypothetical protein -
  A6P39_RS19785 (A6P39_019795) - 4452561..4453436 (+) 876 WP_067052717.1 A/G-specific adenine glycosylase -
  A6P39_RS19790 (A6P39_019800) - 4453718..4454257 (+) 540 WP_067052719.1 SigE family RNA polymerase sigma factor -
  A6P39_RS19795 (A6P39_019805) - 4454299..4454889 (+) 591 WP_275883988.1 hypothetical protein -
  A6P39_RS19800 (A6P39_019810) cseB 4454978..4455682 (+) 705 WP_067051464.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39970.67 Da        Isoelectric Point: 4.9235

>NTDB_id=725059 A6P39_RS19775 WP_067052714.1 4450379..4451503(+) (disA) [Streptomyces sp. FXJ1.172]
MAANDRAAAPGKSGGSAGSDGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPDRELVVRDYVPEPTAKRSRTVEEALSELDALTHAELLELGTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=725059 A6P39_RS19775 WP_067052714.1 4450379..4451503(+) (disA) [Streptomyces sp. FXJ1.172]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTTCCGATGGCCTGATGCGCGCCTCGCT
GAGCGCCGTGGCTCCCGGTACGGCCCTGCGTGACGGCCTCGAGCGCGTGCTGCGCGGCAACACCGGCGGGCTGATCGTCC
TCGGCTCGGACAAGACGGTCGAGGCGATGTGCACGGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGG
GAGCTGTGCAAGCTGGACGGCGGCATCGTCCTGTCGTCGGACCTGTCGAAGATCCTGCGCGCGGGCGTGCAGCTGGTGCC
GGACCCGACGATCCCGACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGGGTGAGCAAGCAGGTCGGTTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTGTACGTGGACGGTCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCACTGGCCACCCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTGGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCCGTCGCCCAGCGGCTGGAGATGGTCCGGCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACGGACGGCCGCCTTCTGGCCCTCCAGCTGGAGGAGCTGATCGCG
GGCGTCGAGCCGGACCGCGAGCTGGTCGTACGGGACTACGTCCCCGAGCCGACGGCGAAGCGCTCCCGCACGGTCGAGGA
GGCGCTGTCCGAGCTGGACGCGCTGACCCACGCGGAGCTGCTGGAACTCGGCACGGTGGCGCGTGCGCTCGGCTACACCG
GATCTCCTGAGACGCTGGACTCCGCGGTGTCCCCGCGGGGCTTCCGGCTGCTGGCGAAGGTTCCGCGGCTGCCGGGCGCG
ATCATCGACCGGCTGGTGGAGCATTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTCGATGACCTGCAGACCGTGGA
CGGTGTGGGCGAGGCCCGGGCGCGCAGCGTGCGGGAGGGACTGTCGCGGCTGGCGGAGTCCTCGATTCTCGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.532

92.513

0.43