Detailed information NTG0725051

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NYR91_RS18775
• Genome accession: NZ_CP103784
• Coordinates: 3648829..3649974 (+)
• Length: 381 a.a.
• NCBI ID: WP_014478296.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain RO-NN-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3643829..3654974

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYR91_RS18755 (NYR91_18755)	albF	3643844..3645124 (+)	1281	WP_014478291.1	pitrilysin family protein	-
NYR91_RS18760 (NYR91_18760)	albG	3645121..3645822 (+)	702	WP_014478292.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
NYR91_RS18765 (NYR91_18765)	ywhL	3645828..3647204 (-)	1377	WP_014478293.1	YncE family protein	-
NYR91_RS18770 (NYR91_18770)	ywhK	3647244..3648599 (-)	1356	WP_014478294.1	YncE family protein	-
NYR91_RS20635	-	3648596..3648826 (-)	231	WP_041519575.1	hypothetical protein	-
NYR91_RS18775 (NYR91_18775)	rapF	3648829..3649974 (+)	1146	WP_014478296.1	response regulator aspartate phosphatase RapF	Regulator
NYR91_RS18780 (NYR91_18780)	phrF	3649958..3650077 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
NYR91_RS18785 (NYR91_18785)	ywhH	3650176..3650649 (+)	474	Protein_3652	YbaK/EbsC family protein	-
NYR91_RS18790 (NYR91_18790)	speB	3650680..3651552 (-)	873	WP_003227545.1	agmatinase	-
NYR91_RS18795 (NYR91_18795)	speE	3651613..3652443 (-)	831	WP_003227543.1	spermidine synthase	-
NYR91_RS18800 (NYR91_18800)	pbpG	3652646..3654721 (+)	2076	WP_014478298.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45579.04 Da
• Isoelectric Point: 5.1464

>NTDB_id=725051 NYR91_RS18775 WP_014478296.1 3648829..3649974(+) (rapF) [Bacillus subtilis strain RO-NN-1]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=725051 NYR91_RS18775 WP_014478296.1 3648829..3649974(+) (rapF) [Bacillus subtilis strain RO-NN-1]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGAGTCCTTGATTATTACTTTAATTTCTTCAG
GGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAGAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.425	100	0.984
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572