Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NYR91_RS02145 Genome accession   NZ_CP103784
Coordinates   423314..424264 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain RO-NN-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 418314..429264
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYR91_RS02120 (NYR91_02120) rapC 419774..420922 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  NYR91_RS02125 (NYR91_02125) phrC 420906..421028 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  NYR91_RS02130 (NYR91_02130) yczM 421128..421217 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  NYR91_RS02135 (NYR91_02135) yczN 421299..421412 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  NYR91_RS02140 (NYR91_02140) thrD 421565..422929 (-) 1365 WP_014475802.1 aspartate kinase -
  NYR91_RS02145 (NYR91_02145) ceuB 423314..424264 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  NYR91_RS02150 (NYR91_02150) yclO 424257..425204 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  NYR91_RS02155 (NYR91_02155) yclP 425198..425956 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  NYR91_RS02160 (NYR91_02160) yclQ 425978..426931 (+) 954 WP_014475807.1 petrobactin ABC transporter substrate-binding protein YclQ -
  NYR91_RS02165 (NYR91_02165) - 427161..428093 (+) 933 WP_014475808.1 restriction endonuclease -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=724988 NYR91_RS02145 WP_014475804.1 423314..424264(+) (ceuB) [Bacillus subtilis strain RO-NN-1]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=724988 NYR91_RS02145 WP_014475804.1 423314..424264(+) (ceuB) [Bacillus subtilis strain RO-NN-1]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTTGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTCTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTAGGTTTAATTATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525