Detailed information NTG0072493

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: M52SOB_RS01730
• Genome accession: NZ_AP019373
• Coordinates: 328958..330298 (+)
• Length: 446 a.a.
• NCBI ID: WP_131110274.1
• Uniprot ID: -
• Organism: Sulfuricystis thermophila strain M52
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 323958..335298

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M52SOB_RS01700	mutY	324723..325766 (-)	1044	WP_131110267.1	A/G-specific adenine glycosylase	-
M52SOB_RS01710	-	325986..326915 (+)	930	WP_131112385.1	polyprenyl synthetase family protein	-
M52SOB_RS01720	-	327124..327348 (+)	225	WP_131110269.1	PP0621 family protein	-
M52SOB_RS01725	-	327351..328961 (+)	1611	WP_131110272.1	ATP-binding protein	-
M52SOB_RS01730	pilR	328958..330298 (+)	1341	WP_131110274.1	sigma-54 dependent transcriptional regulator	Regulator
M52SOB_RS01735	ampD	330431..330991 (+)	561	WP_131110276.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
M52SOB_RS01740	-	331523..332086 (+)	564	WP_131110278.1	histone H1-like DNA-binding protein	-
M52SOB_RS01745	-	332133..333293 (-)	1161	WP_131110279.1	pyridoxal phosphate-dependent aminotransferase	-
M52SOB_RS01750	-	333293..335104 (-)	1812	WP_284155155.1	phosphoenolpyruvate carboxykinase (GTP)	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49111.38 Da
• Isoelectric Point: 5.4215

>NTDB_id=72493 M52SOB_RS01730 WP_131110274.1 328958..330298(+) (pilR) [Sulfuricystis thermophila strain M52]
MTPRVLIVDDEADIRELLDMTLARMGLECDSAASVAEAKRLLRERAYQLCLTDMRMPDGDGLELVREIEAHYPTLPVAVI
TAHGSTENAVAALKAGAFDYLAKPVSLAQLRTLVKSALAVPESKAGTVARCQELLGRSPPIVQVRELIAKVAKSEAPVYI
SGESGSGKELAARLIHQGSRRRDEPFIAVNCGAIPENLMESEFFGYRKGAFTGADSEREGFFQAADGGTLFLDEVADLPL
PMQVKLLRAIQEKHVRRVGATTEEPVNVRIICATHQDLRQLMEAGRFRQDLFFRLNVIEIHMPALRECREDVAEFAQRIL
ERLATASGLPVPRLTSQAMAALMAYDFPGNVRELENILERALALHGGDVIDSEDLQLQPPKVGGAETAGIGGKPLQEFLD
EQERQAILDALQKTRYNRTAAARLLGVTFRSLRYRMERLGLNETSA

Nucleotide

• Length: 1341 bp

>NTDB_id=72493 M52SOB_RS01730 WP_131110274.1 328958..330298(+) (pilR) [Sulfuricystis thermophila strain M52]
ATGACGCCAAGAGTGCTGATCGTCGACGACGAAGCAGACATCCGCGAGTTGCTCGACATGACCTTGGCACGCATGGGGCT
CGAATGCGATAGTGCCGCCAGCGTCGCCGAGGCCAAACGGCTGTTGCGCGAACGAGCCTATCAGCTGTGTCTGACCGACA
TGCGCATGCCCGATGGCGATGGCCTGGAACTGGTCCGCGAGATCGAGGCCCACTACCCGACGTTGCCGGTGGCGGTGATC
ACGGCGCATGGCAGCACCGAAAATGCCGTCGCGGCGCTGAAGGCCGGCGCCTTCGACTATCTCGCCAAGCCGGTGTCACT
CGCCCAGTTGCGCACGCTGGTCAAATCCGCCCTTGCCGTCCCCGAAAGCAAGGCTGGCACTGTGGCACGCTGCCAGGAAC
TGCTTGGTCGCTCGCCGCCGATCGTCCAAGTGCGCGAGCTGATCGCCAAGGTGGCGAAGAGCGAAGCGCCCGTCTATATC
TCGGGGGAATCCGGCAGTGGCAAGGAGCTTGCAGCCCGGCTGATCCACCAGGGCAGCCGGCGGCGTGACGAGCCGTTCAT
CGCGGTCAACTGCGGCGCGATCCCGGAAAACCTGATGGAAAGCGAATTCTTCGGTTATCGCAAGGGGGCATTCACGGGCG
CCGACAGCGAGCGTGAAGGTTTCTTCCAGGCAGCCGATGGCGGCACGCTGTTCCTCGACGAAGTCGCCGACCTGCCCTTG
CCGATGCAGGTAAAGCTGCTGCGCGCGATCCAGGAAAAGCATGTGCGGCGTGTCGGCGCGACGACCGAAGAGCCGGTCAA
TGTGCGCATCATCTGCGCAACGCATCAGGATTTGCGCCAGCTGATGGAAGCAGGGCGCTTCCGTCAGGATCTGTTCTTCC
GGCTCAACGTGATCGAGATCCATATGCCGGCCTTGCGTGAATGCCGCGAGGATGTAGCCGAATTCGCGCAGCGCATCCTG
GAAAGACTTGCCACCGCCAGTGGCTTGCCAGTGCCACGACTCACTTCCCAAGCAATGGCTGCACTGATGGCCTATGACTT
TCCCGGCAATGTGCGCGAGCTCGAGAACATCCTCGAACGGGCGCTCGCTTTGCATGGCGGCGACGTCATCGACAGCGAAG
ATCTGCAATTGCAACCGCCGAAAGTCGGCGGTGCCGAGACGGCTGGCATCGGCGGCAAGCCACTCCAGGAATTTCTCGAC
GAACAGGAACGCCAGGCGATTCTCGATGCGTTGCAAAAAACCCGTTACAACCGCACGGCAGCCGCGCGTTTGCTGGGTGT
GACCTTCCGCTCACTGCGCTATAGGATGGAGCGGCTGGGGCTCAATGAAACCTCTGCCTAA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Response regulator receiver domain (Response_reg) (5-114)

• Bacterial regulatory protein, Fis family (HTH_8) (399-438)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	57.562	99.327	0.572
pilR	Acinetobacter baumannii strain A118	46.204	100	0.478