Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   PXV45_RS12775 Genome accession   NZ_CP119109
Coordinates   2534510..2535355 (-) Length   281 a.a.
NCBI ID   WP_001825659.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GENOMIC22-001     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2529510..2540355
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PXV45_RS12735 (PXV45_12735) - 2529821..2530041 (+) 221 Protein_2471 site-specific integrase -
  PXV45_RS12740 (PXV45_12740) rpsR 2530498..2530740 (-) 243 WP_000897044.1 30S ribosomal protein S18 -
  PXV45_RS12745 (PXV45_12745) ssbA 2530792..2531295 (-) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  PXV45_RS12750 (PXV45_12750) rpsF 2531316..2531612 (-) 297 WP_001261460.1 30S ribosomal protein S6 -
  PXV45_RS12755 (PXV45_12755) - 2531856..2532047 (+) 192 WP_001052481.1 hypothetical protein -
  PXV45_RS12760 (PXV45_12760) ychF 2532133..2533230 (-) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  PXV45_RS12765 (PXV45_12765) - 2533242..2533445 (-) 204 WP_000157348.1 DUF951 domain-containing protein -
  PXV45_RS12770 (PXV45_12770) - 2533475..2534356 (-) 882 WP_000373073.1 mechanosensitive ion channel family protein -
  PXV45_RS12775 (PXV45_12775) spo0J 2534510..2535355 (-) 846 WP_001825659.1 ParB/RepB/Spo0J family partition protein Regulator
  PXV45_RS12780 (PXV45_12780) - 2536019..2537122 (+) 1104 WP_000655690.1 PLP-dependent transferase -
  PXV45_RS12785 (PXV45_12785) metC 2537119..2538279 (+) 1161 WP_000175863.1 cystathionine beta-lyase MetC -
  PXV45_RS12790 (PXV45_12790) - 2538248..2540089 (+) 1842 WP_000077324.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32797.86 Da        Isoelectric Point: 10.0554

>NTDB_id=724859 PXV45_RS12775 WP_001825659.1 2534510..2535355(-) (spo0J) [Staphylococcus aureus strain GENOMIC22-001]
MSELSKSEDQRITKTKDEQIKKIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=724859 PXV45_RS12775 WP_001825659.1 2534510..2535355(-) (spo0J) [Staphylococcus aureus strain GENOMIC22-001]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGAAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTAAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAGGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381