Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   NYR47_RS21245 Genome accession   NZ_CP103777
Coordinates   4151797..4152591 (-) Length   264 a.a.
NCBI ID   WP_000411416.1    Uniprot ID   A0A1G4L491
Organism   Bacillus toyonensis strain DC11     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4146797..4157591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYR47_RS21230 - 4147797..4149224 (-) 1428 WP_259416193.1 hypothetical protein -
  NYR47_RS21235 - 4149593..4151116 (-) 1524 WP_097952990.1 glycosyltransferase family 39 protein -
  NYR47_RS21240 - 4151294..4151593 (-) 300 WP_259417810.1 hypothetical protein -
  NYR47_RS21245 spo0A 4151797..4152591 (-) 795 WP_000411416.1 sporulation transcription factor Spo0A Regulator
  NYR47_RS21250 spoIVB 4152880..4154178 (-) 1299 WP_002048975.1 SpoIVB peptidase -
  NYR47_RS21255 recN 4154297..4156036 (-) 1740 WP_000947736.1 DNA repair protein RecN Machinery gene
  NYR47_RS21260 argR 4156298..4156747 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29427.13 Da        Isoelectric Point: 7.1176

>NTDB_id=724796 NYR47_RS21245 WP_000411416.1 4151797..4152591(-) (spo0A) [Bacillus toyonensis strain DC11]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=724796 NYR47_RS21245 WP_000411416.1 4151797..4152591(-) (spo0A) [Bacillus toyonensis strain DC11]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAGCCTGATGTACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTAACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACCTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACTAGTCATATTCGTCAAGTGAGTGGCAAGGCAAATGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACAATAGATGGAAAACCGAAAAACTTAGATGCAAGTATTACGAGTATTATTCATGAA
ATTGGTGTACCTGCTCATATTAAAGGGTACATGTACTTACGAGAAGCGATTTCTATGGTGTACAATGATATCGAATTACT
AGGGTCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCGAGCCGTGTCGAGCGTGCAATCC
GTCACGCGATTGAAGTAGCGTGGAGCCGTGGAAATATTGATTCTATTTCGTCCTTATTTGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1G4L491

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814