Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NYR47_RS06075 Genome accession   NZ_CP103777
Coordinates   1186197..1186373 (+) Length   58 a.a.
NCBI ID   WP_001003338.1    Uniprot ID   A0A1V6LL20
Organism   Bacillus toyonensis strain DC11     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1181197..1191373
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYR47_RS06055 clpC 1181520..1184120 (+) 2601 WP_259417024.1 ATP-dependent chaperone ClpB Regulator
  NYR47_RS06060 - 1184157..1184339 (-) 183 WP_259417025.1 YjzD family protein -
  NYR47_RS06065 - 1184496..1185230 (+) 735 WP_000028709.1 hypothetical protein -
  NYR47_RS06070 - 1185260..1186132 (+) 873 WP_000486174.1 NAD(P)-dependent oxidoreductase -
  NYR47_RS06075 comZ 1186197..1186373 (+) 177 WP_001003338.1 ComZ family protein Regulator
  NYR47_RS06080 fabH 1186607..1187539 (+) 933 WP_001100553.1 beta-ketoacyl-ACP synthase III -
  NYR47_RS06085 fabF 1187570..1188808 (+) 1239 WP_000412641.1 beta-ketoacyl-ACP synthase II -
  NYR47_RS06090 - 1188915..1189706 (+) 792 WP_259417027.1 DUF2268 domain-containing protein -
  NYR47_RS06095 - 1189849..1190595 (+) 747 WP_000966122.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6606.76 Da        Isoelectric Point: 4.4963

>NTDB_id=724779 NYR47_RS06075 WP_001003338.1 1186197..1186373(+) (comZ) [Bacillus toyonensis strain DC11]
MNEKSMQFLQIAMKHLPEAKAILDSNGIELDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=724779 NYR47_RS06075 WP_001003338.1 1186197..1186373(+) (comZ) [Bacillus toyonensis strain DC11]
ATGAACGAAAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAGGCAAAGGCAATTTTAGATTCGAATGG
AATTGAGCTTGATATGGAGAAGGCTCAACCAGTGTTAGAGTTATTAATGAAAGTTATGAATGAAGCATATGAGCTTGGGA
AAGCAGACAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V6LL20

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

63.636

94.828

0.603