Detailed information NTG0724707

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PY718_RS06535
• Genome accession: NZ_CP119011
• Coordinates: 1353349..1354374 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CE0007a
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1348349..1359374

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PY718_RS06515 (PY718_06515)	metJ	1349534..1349851 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
PY718_RS06520 (PY718_06520)	yiiX	1349911..1350519 (+)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
PY718_RS06525 (PY718_06525)	rpmE	1350580..1350792 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PY718_RS06530 (PY718_06530)	priA	1350995..1353193 (+)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
PY718_RS06535 (PY718_06535)	cytR	1353349..1354374 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PY718_RS06540 (PY718_06540)	ftsN	1354466..1355425 (+)	960	WP_000068844.1	cell division protein FtsN	-
PY718_RS06545 (PY718_06545)	hslV	1355518..1356048 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PY718_RS06550 (PY718_06550)	hslU	1356058..1357389 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
PY718_RS06555 (PY718_06555)	menA	1357456..1358382 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PY718_RS06560 (PY718_06560)	rraA	1358475..1358960 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=724707 PY718_RS06535 WP_000644904.1 1353349..1354374(+) (cytR) [Escherichia coli strain CE0007a]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=724707 PY718_RS06535 WP_000644904.1 1353349..1354374(+) (cytR) [Escherichia coli strain CE0007a]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628