Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NYR93_RS09380 Genome accession   NZ_CP103769
Coordinates   1971658..1971849 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain ML61     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1966658..1976849
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYR93_RS09355 (NYR93_09355) - 1967014..1968000 (-) 987 WP_014304782.1 ABC transporter ATP-binding protein -
  NYR93_RS09360 (NYR93_09360) - 1968174..1968959 (-) 786 WP_264255064.1 DUF2268 domain-containing protein -
  NYR93_RS09365 (NYR93_09365) fabF 1969043..1970281 (-) 1239 WP_264255065.1 beta-ketoacyl-ACP synthase II -
  NYR93_RS09370 (NYR93_09370) - 1970304..1971242 (-) 939 WP_003155057.1 beta-ketoacyl-ACP synthase III -
  NYR93_RS09375 (NYR93_09375) - 1971410..1971628 (+) 219 WP_003155059.1 hypothetical protein -
  NYR93_RS09380 (NYR93_09380) comZ 1971658..1971849 (-) 192 WP_003155061.1 ComZ family protein Regulator
  NYR93_RS09385 (NYR93_09385) med 1971862..1972815 (-) 954 WP_003155063.1 BMP family ABC transporter substrate-binding protein Regulator
  NYR93_RS09390 (NYR93_09390) - 1972905..1973471 (-) 567 WP_264255066.1 hypothetical protein -
  NYR93_RS09395 (NYR93_09395) - 1973554..1974288 (-) 735 WP_264255067.1 alpha/beta hydrolase -
  NYR93_RS09400 (NYR93_09400) - 1974549..1974734 (+) 186 WP_003155069.1 YjzD family protein -
  NYR93_RS09405 (NYR93_09405) - 1974771..1974950 (-) 180 WP_003155070.1 YjzC family protein -
  NYR93_RS09410 (NYR93_09410) argF 1975026..1975997 (-) 972 WP_264255068.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=724633 NYR93_RS09380 WP_003155061.1 1971658..1971849(-) (comZ) [Bacillus velezensis strain ML61]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=724633 NYR93_RS09380 WP_003155061.1 1971658..1971849(-) (comZ) [Bacillus velezensis strain ML61]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794