Detailed information NTG0724248

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: PYW37_RS11095
• Genome accession: NZ_CP118969
• Coordinates: 2191021..2192097 (+)
• Length: 358 a.a.
• NCBI ID: WP_023188655.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain DSM 20481
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2186021..2197097

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PYW37_RS11070	pgsA	2186129..2186701 (-)	573	WP_012898490.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
PYW37_RS11075	-	2186742..2187638 (-)	897	WP_025016931.1	RodZ family helix-turn-helix domain-containing protein	-
PYW37_RS11080	-	2187902..2189185 (-)	1284	WP_023188656.1	pitrilysin family protein	-
PYW37_RS11085	-	2189175..2190461 (-)	1287	WP_023164564.1	pitrilysin family protein	-
PYW37_RS11090	yaaA	2190659..2191021 (+)	363	WP_012898492.1	S4 domain-containing protein YaaA	-
PYW37_RS11095	recF	2191021..2192097 (+)	1077	WP_023188655.1	DNA replication/repair protein RecF	Machinery gene
PYW37_RS11100	-	2192184..2192552 (-)	369	WP_023188654.1	carboxymuconolactone decarboxylase family protein	-
PYW37_RS11105	-	2192630..2193007 (+)	378	WP_012898494.1	MerR family transcriptional regulator	-
PYW37_RS11110	-	2193019..2193942 (-)	924	WP_023188653.1	alpha/beta hydrolase	-
PYW37_RS11115	-	2194351..2194848 (+)	498	WP_025016930.1	hypothetical protein	-
PYW37_RS11120	-	2194999..2195301 (+)	303	WP_232238875.1	hypothetical protein	-
PYW37_RS11125	-	2195547..2195762 (+)	216	WP_025016927.1	hypothetical protein	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 41356.23 Da
• Isoelectric Point: 6.8652

>NTDB_id=724248 PYW37_RS11095 WP_023188655.1 2191021..2192097(+) (recF) [Lactococcus lactis strain DSM 20481]
MKLKAIELKNFRNYEELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKELISWSQQEMKVSGVVEKAHAT
IPLEVQLSPKGRIAKANHLKENRLADYIGQLKILMFAPENLELVKGSPATRRKFMDIELGQIHAVYLYDSMRYNRALKER
NAYLKFDKDKIDKNFLSVLDGQLAEHGNKIMLERQNFVDKLEVHAKKIHEQLTHGKENLKIIYNQNVKTDFSKELLSRQD
HDIFRHQTSVGPHRDDLQFFINEINVADFGSQGQQRTVALSIKLAEIDLIFEETGEYPILLLDDVMSELDNHRQLDLIET
SLGKTQTFITTTTLDHLKNLPENLSIFHVNAGTIEQEQ

Nucleotide

• Length: 1077 bp

>NTDB_id=724248 PYW37_RS11095 WP_023188655.1 2191021..2192097(+) (recF) [Lactococcus lactis strain DSM 20481]
ATGAAACTCAAAGCAATTGAACTCAAAAATTTTCGTAATTATGAGGAATTAAAACTTGATTTTCATCCTAATCTCAATAT
TTTTTTAGGACAAAATGCTCAAGGGAAAACAAATATTCTTGAGGCGATTCATTTTTTAGCACTCACTCGTAGTCACAGAA
CCAGTCACGATAAAGAGCTCATTTCTTGGTCGCAACAAGAAATGAAGGTCTCAGGAGTCGTTGAAAAAGCTCATGCAACT
ATTCCACTTGAAGTTCAATTAAGTCCCAAAGGGAGAATTGCTAAAGCCAATCATCTCAAAGAAAATCGCTTAGCCGACTA
CATTGGTCAACTAAAAATCTTGATGTTTGCACCTGAAAATTTGGAATTGGTCAAAGGTTCTCCTGCTACCCGCAGAAAAT
TTATGGATATTGAACTGGGACAAATCCATGCGGTTTACCTTTATGATTCCATGCGATATAATCGTGCGTTAAAAGAACGG
AATGCTTATTTAAAATTTGATAAAGACAAAATTGATAAAAATTTTTTAAGTGTTCTTGACGGACAATTAGCTGAACATGG
TAATAAAATCATGCTTGAGCGGCAAAATTTTGTTGATAAACTTGAAGTTCATGCAAAAAAAATCCATGAGCAACTTACTC
ATGGTAAAGAAAATTTAAAAATCATTTATAATCAAAATGTGAAAACTGACTTTTCAAAAGAATTATTGAGCAGACAAGAC
CATGATATTTTTAGGCATCAAACATCGGTTGGCCCTCATCGTGACGATTTACAATTTTTTATCAATGAGATTAATGTTGC
TGATTTTGGTAGTCAAGGACAACAACGAACCGTTGCTCTCTCAATTAAATTAGCAGAAATTGATTTAATTTTTGAAGAGA
CTGGTGAGTATCCGATTTTACTTTTAGATGATGTCATGAGTGAATTAGACAATCATCGTCAACTTGATTTGATTGAAACA
AGTTTGGGTAAAACACAAACTTTTATAACTACAACTACTCTTGATCATCTTAAAAATTTACCTGAAAATCTGAGTATTTT
CCATGTTAATGCTGGAACCATTGAACAAGAGCAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	55	100	0.553
recF	Bacillus subtilis subsp. subtilis str. 168	46.264	97.207	0.45