Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   PYW37_RS02090 Genome accession   NZ_CP118969
Coordinates   398833..399615 (+) Length   260 a.a.
NCBI ID   WP_025016551.1    Uniprot ID   -
Organism   Lactococcus lactis strain DSM 20481     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 393833..404615
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PYW37_RS02065 vicX 393858..394670 (-) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator
  PYW37_RS02070 vicK 394839..396281 (-) 1443 WP_012897229.1 cell wall metabolism sensor histidine kinase WalK Regulator
  PYW37_RS02075 yycF 396274..396975 (-) 702 WP_003131580.1 response regulator YycF -
  PYW37_RS02080 tmk 397153..397788 (+) 636 WP_012897230.1 dTMP kinase -
  PYW37_RS02085 - 397921..398781 (+) 861 WP_012897231.1 DNA polymerase III subunit delta' -
  PYW37_RS02090 yaaT 398833..399615 (+) 783 WP_025016551.1 stage 0 sporulation family protein Regulator
  PYW37_RS02095 yabA 399608..399934 (+) 327 WP_011675472.1 DNA replication initiation control protein YabA -
  PYW37_RS02100 rsmI 399934..400809 (+) 876 WP_003131568.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  PYW37_RS02105 - 400886..401077 (-) 192 WP_012897234.1 hypothetical protein -
  PYW37_RS02110 mvk 401141..402073 (-) 933 WP_003131564.1 mevalonate kinase -
  PYW37_RS02115 mvaD 402378..403334 (+) 957 WP_023188990.1 diphosphomevalonate decarboxylase -
  PYW37_RS02120 - 403321..404310 (+) 990 WP_021721904.1 mevalonate kinase -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29831.32 Da        Isoelectric Point: 6.0566

>NTDB_id=724196 PYW37_RS02090 WP_025016551.1 398833..399615(+) (yaaT) [Lactococcus lactis strain DSM 20481]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLIIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFLTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=724196 PYW37_RS02090 WP_025016551.1 398833..399615(+) (yaaT) [Lactococcus lactis strain DSM 20481]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCTAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTATCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTTTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

45.662

84.231

0.385