Detailed information NTG0723580

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: PWP91_RS11735
• Genome accession: NZ_CP118738
• Coordinates: 2350297..2351373 (+)
• Length: 358 a.a.
• NCBI ID: WP_010906242.1
• Uniprot ID: Q9CE70
• Organism: Lactococcus lactis strain P-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2345297..2356373

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PWP91_RS11710 (PWP91_11710)	pgsA	2345404..2345976 (-)	573	WP_012898490.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
PWP91_RS11715 (PWP91_11715)	-	2346017..2346913 (-)	897	WP_017865077.1	helix-turn-helix domain-containing protein	-
PWP91_RS11720 (PWP91_11720)	yfmH	2347178..2348461 (-)	1284	WP_058220661.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
PWP91_RS11725 (PWP91_11725)	yfmF	2348451..2349737 (-)	1287	WP_201012075.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
PWP91_RS11730 (PWP91_11730)	yaaA	2349935..2350297 (+)	363	WP_012898492.1	S4 domain-containing protein YaaA	-
PWP91_RS11735 (PWP91_11735)	recF	2350297..2351373 (+)	1077	WP_010906242.1	DNA replication/repair protein RecF	Machinery gene
PWP91_RS11740 (PWP91_11740)	-	2351460..2351829 (-)	370	Protein_2264	carboxymuconolactone decarboxylase family protein	-
PWP91_RS11745 (PWP91_11745)	-	2351907..2352284 (+)	378	WP_109991317.1	MerR family transcriptional regulator	-
PWP91_RS11750 (PWP91_11750)	-	2352298..2353245 (-)	948	WP_274998576.1	alpha/beta hydrolase	-
PWP91_RS11755 (PWP91_11755)	galE	2353367..2354347 (-)	981	WP_274998577.1	UDP-glucose 4-epimerase GalE	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 41356.23 Da
• Isoelectric Point: 6.8652

>NTDB_id=723580 PWP91_RS11735 WP_010906242.1 2350297..2351373(+) (recF) [Lactococcus lactis strain P-1]
MKLKAIELKNFRNYEELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKELISWSQQEMKVSGVVEKAHAT
VPLEVQLSPKGRIAKANHLKENRLADYIGQLKILMFAPENLELVKGSPATRRKFMDIELGQIHAVYLYDSMRYNRALKER
NAYLKFDKDKIDKNFLSVLDGQLAEHGNKIMLERQNFIDKLEVHAKKIHEQLTHGKENLKIIYNQNVKTDFSKELLSRQD
HDIFRHQTSVGPHRDDLQFFINEINVADFGSQGQQRTVALSIKLAEIDLIFEETGEYPILLLDDVMSELDNHRQLDLIET
SLGKTQTFITTTTLDHLKNLPENLSIFHVNAGTIEQEQ

Nucleotide

• Length: 1077 bp

>NTDB_id=723580 PWP91_RS11735 WP_010906242.1 2350297..2351373(+) (recF) [Lactococcus lactis strain P-1]
ATGAAACTCAAAGCAATTGAACTCAAAAATTTTCGTAATTATGAGGAATTAAAACTTGATTTTCATCCTAATCTCAATAT
TTTTTTAGGACAAAATGCTCAAGGGAAAACAAATATTCTTGAGGCGATTCATTTTTTAGCACTCACTCGTAGTCACAGAA
CAAGTCACGATAAAGAGCTCATTTCTTGGTCGCAACAAGAAATGAAAGTCTCAGGAGTCGTTGAAAAAGCTCATGCAACT
GTTCCACTTGAAGTTCAATTAAGTCCCAAAGGGAGAATTGCTAAAGCCAATCATCTCAAAGAAAATCGCTTAGCCGACTA
CATTGGTCAACTAAAAATCTTGATGTTTGCACCTGAAAATTTGGAATTGGTCAAAGGTTCTCCTGCTACCCGCAGAAAAT
TTATGGATATTGAACTGGGACAAATCCATGCGGTTTACCTTTATGATTCCATGCGATATAATCGTGCGTTAAAAGAACGG
AATGCTTATTTAAAATTTGATAAAGACAAAATTGATAAAAATTTTTTAAGTGTTCTTGACGGACAATTAGCTGAACATGG
TAATAAAATCATGCTTGAGCGGCAAAATTTTATTGATAAACTTGAAGTTCATGCAAAAAAAATCCATGAGCAACTTACTC
ATGGTAAAGAAAATTTAAAAATCATTTATAATCAAAATGTGAAAACTGACTTTTCAAAAGAATTATTGAGCAGACAAGAC
CATGATATTTTTAGGCATCAAACATCGGTTGGCCCTCATCGTGACGATTTACAATTTTTTATCAATGAGATCAATGTTGC
TGATTTTGGTAGTCAAGGACAACAACGAACCGTTGCTCTCTCAATTAAATTAGCAGAAATTGATTTAATTTTTGAAGAGA
CTGGAGAGTATCCGATTTTACTTTTAGATGATGTCATGAGTGAATTAGACAATCATCGTCAACTTGATTTGATTGAAACA
AGTTTGGGTAAAACACAAACTTTTATAACTACAACTACTCTTGATCATCTTAAAAATTTACCTGAAAATCTGAGTATTTT
CCATGTTAATGCTGGAACCATTGAACAAGAGCAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-353)

3D structure

• AlphaFold DB: Q9CE70

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	55	100	0.553
recF	Bacillus subtilis subsp. subtilis str. 168	45.977	97.207	0.447