Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   PV796_RS17250 Genome accession   NZ_CP118574
Coordinates   4084157..4085278 (+) Length   373 a.a.
NCBI ID   WP_067348330.1    Uniprot ID   -
Organism   Streptomyces sp. WZ-12     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4079157..4090278
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PV796_RS17235 - 4079618..4080511 (+) 894 WP_274914155.1 hypothetical protein -
  PV796_RS17240 - 4080611..4082413 (-) 1803 WP_274914157.1 sigma-70 family RNA polymerase sigma factor -
  PV796_RS17245 radA/sms 4082612..4084024 (+) 1413 WP_274914158.1 DNA repair protein RadA Machinery gene
  PV796_RS17250 disA 4084157..4085278 (+) 1122 WP_067348330.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  PV796_RS17255 - 4085489..4086475 (-) 987 WP_274914159.1 NAD-dependent epimerase/dehydratase family protein -
  PV796_RS17260 - 4086641..4087468 (-) 828 WP_274914160.1 hypothetical protein -
  PV796_RS17265 - 4087664..4088206 (-) 543 WP_274919076.1 pyridoxamine 5'-phosphate oxidase family protein -
  PV796_RS17270 - 4088348..4089307 (+) 960 WP_274914161.1 A/G-specific adenine glycosylase -

Sequence

Protein


Download         Length: 373 a.a.        Molecular weight: 40217.02 Da        Isoelectric Point: 4.9340

>NTDB_id=723032 PV796_RS17250 WP_067348330.1 4084157..4085278(+) (disA) [Streptomyces sp. WZ-12]
MAANDRASSPGRSAGTGTESLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVESMCSGGFVLDVEFTATRLRE
LCKLDGALVLDKDITKILRAGVQLVPDASIPTEETGTRHRTAQRVSIQTNFPVVSVSQSMRLIALYVDGERRVLEESAAI
LSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIAG
VEPERELVARDYVPEPTAKRSRTVAEALAELDALTHTELLELPIVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGAV
IDRLVDHFGGLQKLLAASVDDLQAVEGVGETRARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=723032 PV796_RS17250 WP_067348330.1 4084157..4085278(+) (disA) [Streptomyces sp. WZ-12]
GTGGCAGCGAACGACCGGGCGTCGTCTCCCGGCAGGTCCGCGGGGACCGGCACCGAGAGCCTGATGCGCGCCTCGCTGAG
CGCCGTCGCGCCCGGTACGGCGCTGCGCGACGGCCTGGAGCGCATCCTCCGCGGCAATACGGGCGGCCTGATCGTCCTCG
GCTTCGACAAGACCGTCGAGTCGATGTGCAGCGGCGGCTTCGTCCTCGACGTGGAGTTCACCGCCACCCGCCTGCGCGAG
CTGTGCAAGCTGGACGGCGCCCTGGTCCTCGACAAGGACATCACCAAGATCCTGCGCGCCGGTGTCCAGTTGGTGCCGGA
CGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACCGCCCAGCGGGTCTCCATCCAGACCAACTTCCCGGTGG
TCTCGGTCAGCCAGTCCATGCGCCTGATCGCGCTCTACGTGGACGGCGAGCGCCGCGTACTGGAGGAGTCCGCCGCGATC
CTCTCCCGCGCCAACCAGGCGCTGGCCACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCCGGCACCCTCTCCGC
CCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTCTCCGCGGTCGCCCAGCGGCTGGAGATGGTCCGCCGGATCGCCA
CCGAGATCGCCGAGTACGTCGTCGAACTGGGCACCGACGGCCGCCTGCTGGCCCTCCAGCTCGAAGAGTTGATCGCCGGC
GTGGAGCCGGAGCGCGAGCTGGTCGCCCGGGACTACGTCCCCGAGCCCACCGCCAAGCGCTCCCGCACGGTCGCCGAGGC
ACTGGCCGAGCTGGACGCGCTCACCCACACCGAGCTGCTCGAACTCCCCATCGTGGCCCGCGCGTTGGGCTACAGCGGCT
CCCCGGAGACGCTGGACTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTCCCTCGCCTCCCCGGCGCGGTC
ATCGACCGCCTGGTGGACCACTTCGGCGGCCTCCAGAAGCTCCTCGCGGCCTCCGTCGACGACCTCCAGGCCGTCGAGGG
CGTCGGCGAAACCCGCGCCCGCTCGGTCCGCGAGGGCCTCTCCCGCCTGGCGGAGTCGTCCATCCTGGAACGGTACGTGT
AA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH)

(331-358)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(37-150)

DisA bacterial checkpoint controller linker region (DisA-linker)

(154-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.818

95.71

0.429