Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   NX050_RS15695 Genome accession   NZ_CP103456
Coordinates   2899552..2900673 (-) Length   373 a.a.
NCBI ID   WP_235091746.1    Uniprot ID   -
Organism   Bacillus subtilis strain PN176 (HK176)     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 2894552..2905673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX050_RS15670 (NX050_15670) cwlQ 2894690..2895424 (+) 735 WP_014479451.1 bifunctional muramidase/murein lytic transglycosylase -
  NX050_RS15675 (NX050_15675) bhbI 2895679..2896077 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  NX050_RS15680 (NX050_15680) spxH 2896074..2896973 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  NX050_RS15685 (NX050_15685) - 2897288..2897455 (+) 168 WP_003244944.1 hypothetical protein -
  NX050_RS15690 (NX050_15690) pepF 2897493..2899322 (-) 1830 WP_173401378.1 oligoendopeptidase F -
  NX050_RS15695 (NX050_15695) coiA 2899552..2900673 (-) 1122 WP_235091746.1 competence protein CoiA Machinery gene
  NX050_RS15700 (NX050_15700) - 2900747..2900869 (+) 123 WP_003245684.1 hypothetical protein -
  NX050_RS15705 (NX050_15705) mecA 2900864..2901520 (-) 657 WP_014479448.1 adaptor protein MecA Regulator
  NX050_RS15710 (NX050_15710) - 2901487..2901627 (-) 141 WP_119122854.1 hypothetical protein -
  NX050_RS15715 (NX050_15715) yjbE 2901797..2902453 (+) 657 WP_014479447.1 TerC family protein -
  NX050_RS15720 (NX050_15720) spx 2902496..2902891 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  NX050_RS15725 (NX050_15725) yjbC 2903072..2903650 (-) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  NX050_RS15730 (NX050_15730) yjbB 2903814..2905031 (-) 1218 WP_072592593.1 MFS transporter -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43795.83 Da        Isoelectric Point: 10.0622

>NTDB_id=722897 NX050_RS15695 WP_235091746.1 2899552..2900673(-) (coiA) [Bacillus subtilis strain PN176 (HK176)]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKEINRL
RLLFYEKRQTSFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=722897 NX050_RS15695 WP_235091746.1 2899552..2900673(-) (coiA) [Bacillus subtilis strain PN176 (HK176)]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACACAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATTCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAATAAATCGCCTT
AGGCTGCTGTTTTATGAGAAGCGGCAGACATCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTGTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTTGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.391

100

0.984