Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   EKM72_RS03525 Genome accession   NZ_AP019305
Coordinates   641579..642622 (-) Length   347 a.a.
NCBI ID   WP_125571277.1    Uniprot ID   -
Organism   Staphylococcus aureus strain TUM9458     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 636579..647622
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EKM72_RS03495 - 637000..638256 (-) 1257 WP_125571275.1 aminopeptidase -
  EKM72_RS03500 - 638259..638459 (-) 201 WP_000180460.1 DUF1128 family protein -
  EKM72_RS03505 - 638606..639070 (+) 465 WP_042109418.1 low molecular weight protein-tyrosine-phosphatase -
  EKM72_RS03510 - 639077..639352 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  EKM72_RS03515 - 639630..640847 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  EKM72_RS03520 vraR 640960..641589 (-) 630 WP_042109421.1 two-component system response regulator VraR Regulator
  EKM72_RS03525 vraS 641579..642622 (-) 1044 WP_125571277.1 sensor histidine kinase Regulator
  EKM72_RS03530 liaF 642619..643320 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  EKM72_RS03535 - 643335..643721 (-) 387 WP_001110179.1 hypothetical protein -
  EKM72_RS03540 map 643938..644696 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  EKM72_RS03550 - 645227..646213 (+) 987 WP_000999717.1 FUSC family protein -
  EKM72_RS03560 - 646644..647057 (-) 414 WP_001557448.1 hypothetical protein -
  EKM72_RS03565 - 647086..647196 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40026.49 Da        Isoelectric Point: 6.0577

>NTDB_id=72261 EKM72_RS03525 WP_125571277.1 641579..642622(-) (vraS) [Staphylococcus aureus strain TUM9458]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPIKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=72261 EKM72_RS03525 WP_125571277.1 641579..642622(-) (vraS) [Staphylococcus aureus strain TUM9458]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATAAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997


Multiple sequence alignment