Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   NX820_RS08975 Genome accession   NZ_CP103391
Coordinates   1828875..1830152 (+) Length   425 a.a.
NCBI ID   WP_015473823.1    Uniprot ID   M5AET0
Organism   Levilactobacillus brevis strain PL102     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1823875..1835152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX820_RS08945 (NX820_08945) tsf 1824313..1825197 (+) 885 WP_011668023.1 translation elongation factor Ts -
  NX820_RS08950 (NX820_08950) pyrH 1825344..1826066 (+) 723 WP_011668022.1 UMP kinase -
  NX820_RS08955 (NX820_08955) frr 1826069..1826626 (+) 558 WP_156646399.1 ribosome recycling factor -
  NX820_RS08960 (NX820_08960) - 1826653..1827075 (+) 423 WP_011668021.1 hypothetical protein -
  NX820_RS08965 (NX820_08965) - 1827178..1827966 (+) 789 WP_041815361.1 isoprenyl transferase -
  NX820_RS08970 (NX820_08970) - 1827988..1828779 (+) 792 WP_011668019.1 phosphatidate cytidylyltransferase -
  NX820_RS08975 (NX820_08975) eeP 1828875..1830152 (+) 1278 WP_015473823.1 RIP metalloprotease RseP Regulator
  NX820_RS08980 (NX820_08980) - 1830188..1831897 (+) 1710 WP_011668017.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 45969.23 Da        Isoelectric Point: 7.2020

>NTDB_id=722459 NX820_RS08975 WP_015473823.1 1828875..1830152(+) (eeP) [Levilactobacillus brevis strain PL102]
MITTIITFIIVFGILVIVHEFGHFYFAKRGGILVREFSIGMGPKLVYHRGKDGTTYTLRLLPVGGYVRMAGAEDDEEELK
PGTPVSLYVGADEKVERINTSKKSTLFNGIPLEVTATDLEDELWIEGYENGDESAIKRYAVAHDATVIESDGTELQIAPK
DVQFQSASLGRRLMTNFAGPMNNILLAIVTFMLMSFAQGGVSMGTNQVQVADSPVSVAKQAGVKTNDKITAVNGRKTTSW
TDLSTAIQPLANKKTTLTIQRGSATKHITVTPKGETSNGKTVGMIGITQAQDKSIGAILASGFTQTWTMTKALFGALWHM
VSGHFSLNDLGGPVAIFATTSQATKFGLVGVLNFLAFLSINLAIVNLLPIPALDGGKILLNFIEAIRRKPLSENVEAAVT
LIGVGFLVLLMLLVTWNDIERYFIH

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=722459 NX820_RS08975 WP_015473823.1 1828875..1830152(+) (eeP) [Levilactobacillus brevis strain PL102]
GTGATTACAACGATTATTACCTTTATCATTGTCTTTGGGATTTTGGTCATTGTCCATGAATTCGGGCATTTTTACTTTGC
CAAGCGAGGCGGCATTCTCGTCCGTGAATTCTCGATTGGAATGGGGCCAAAATTGGTTTACCACCGTGGCAAAGATGGCA
CGACTTACACACTGCGGTTATTACCAGTGGGCGGTTACGTCCGGATGGCGGGTGCTGAAGATGACGAAGAAGAGCTGAAA
CCGGGAACGCCAGTTAGCCTGTACGTGGGCGCTGACGAAAAGGTTGAACGAATCAATACCAGCAAAAAATCCACGTTATT
TAACGGTATTCCGTTAGAAGTTACCGCAACGGATCTAGAGGATGAGTTGTGGATTGAAGGCTATGAAAATGGTGACGAAA
GTGCCATTAAGCGCTATGCGGTTGCTCACGATGCCACGGTGATTGAAAGCGACGGGACGGAGCTACAAATTGCCCCGAAG
GACGTTCAATTTCAGTCGGCATCATTAGGCCGACGATTGATGACGAACTTCGCTGGACCGATGAACAATATCTTATTAGC
GATTGTTACCTTTATGCTGATGTCCTTTGCTCAGGGTGGCGTTTCAATGGGCACGAATCAGGTTCAAGTAGCTGATTCAC
CGGTATCAGTGGCGAAACAGGCTGGCGTGAAGACCAACGATAAGATTACGGCAGTCAACGGTCGAAAGACCACCAGCTGG
ACCGATCTTAGTACCGCGATTCAGCCATTGGCCAACAAAAAAACAACGCTGACGATTCAAAGAGGATCGGCGACCAAACA
CATTACAGTGACACCTAAAGGTGAAACTTCCAACGGTAAAACGGTGGGGATGATTGGGATCACGCAAGCCCAAGATAAGA
GCATTGGGGCCATCTTAGCTTCTGGATTTACACAGACGTGGACGATGACCAAAGCGTTGTTTGGGGCTTTGTGGCACATG
GTTTCTGGTCACTTTAGTTTGAACGATTTAGGCGGACCAGTCGCCATTTTTGCCACAACCTCACAGGCCACCAAGTTTGG
CTTGGTTGGCGTGTTAAATTTCTTAGCCTTTTTATCAATTAATTTGGCAATTGTGAACTTACTGCCGATTCCAGCCTTGG
ATGGTGGTAAAATATTATTAAACTTTATTGAAGCTATTCGGCGTAAGCCGCTTTCAGAAAATGTGGAAGCTGCCGTTACG
TTGATTGGCGTGGGGTTCTTAGTTCTGCTTATGTTACTGGTGACGTGGAATGATATTGAACGCTACTTTATTCATTAA

Domains


Predicted by InterproScan.

(214-261)

(7-410)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB M5AET0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.706

100

0.487

  eeP Streptococcus thermophilus LMD-9

48.706

100

0.487