Detailed information NTG0722334

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PVF01_RS22485
• Genome accession: NZ_CP118407
• Coordinates: 4684885..4685910 (+)
• Length: 341 a.a.
• NCBI ID: WP_021552958.1
• Uniprot ID: -
• Organism: Escherichia coli strain GABEEC10
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4679885..4690910

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PVF01_RS22465 (PVF01_22375)	metJ	4681070..4681387 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
PVF01_RS22470 (PVF01_22380)	yiiX	4681447..4682055 (+)	609	WP_000702297.1	YiiX family permuted papain-like enzyme	-
PVF01_RS22475 (PVF01_22385)	rpmE	4682116..4682328 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PVF01_RS22480 (PVF01_22390)	priA	4682531..4684729 (+)	2199	WP_001298416.1	primosomal protein N'	Machinery gene
PVF01_RS22485 (PVF01_22395)	cytR	4684885..4685910 (+)	1026	WP_021552958.1	DNA-binding transcriptional regulator CytR	Regulator
PVF01_RS22490 (PVF01_22400)	ftsN	4686002..4686961 (+)	960	WP_000068847.1	cell division protein FtsN	-
PVF01_RS22495 (PVF01_22405)	hslV	4687054..4687584 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PVF01_RS22500 (PVF01_22410)	hslU	4687594..4688925 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
PVF01_RS22505 (PVF01_22415)	menA	4688992..4689918 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PVF01_RS22510 (PVF01_22420)	rraA	4690011..4690496 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PVF01_RS22515 (PVF01_22425)	zapB	4690581..4690826 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37766.73 Da
• Isoelectric Point: 6.1606

>NTDB_id=722334 PVF01_RS22485 WP_021552958.1 4684885..4685910(+) (cytR) [Escherichia coli strain GABEEC10]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTCALP

Nucleotide

• Length: 1026 bp

>NTDB_id=722334 PVF01_RS22485 WP_021552958.1 4684885..4685910(+) (cytR) [Escherichia coli strain GABEEC10]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACATGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628