Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   NX823_RS06320 Genome accession   NZ_CP103352
Coordinates   1248435..1249091 (+) Length   218 a.a.
NCBI ID   WP_015383354.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM117508     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1243435..1254091
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX823_RS06290 (NX823_06290) oppF 1243899..1244816 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  NX823_RS06295 (NX823_06295) yjbB 1244924..1246141 (+) 1218 WP_095010820.1 MFS transporter -
  NX823_RS06300 (NX823_06300) yjbC 1246305..1246883 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  NX823_RS06305 (NX823_06305) spx 1247064..1247459 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  NX823_RS06310 (NX823_06310) yjbE 1247502..1248158 (-) 657 WP_014479447.1 TerC family protein -
  NX823_RS06315 (NX823_06315) - 1248328..1248468 (+) 141 WP_119122854.1 hypothetical protein -
  NX823_RS06320 (NX823_06320) mecA 1248435..1249091 (+) 657 WP_015383354.1 adaptor protein MecA Regulator
  NX823_RS06325 (NX823_06325) - 1249086..1249208 (-) 123 WP_003245684.1 hypothetical protein -
  NX823_RS06330 (NX823_06330) coiA 1249252..1250403 (+) 1152 WP_029726275.1 competence protein CoiA Machinery gene
  NX823_RS06335 (NX823_06335) pepF 1250633..1252462 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  NX823_RS06340 (NX823_06340) - 1252500..1252667 (-) 168 WP_003244944.1 hypothetical protein -
  NX823_RS06345 (NX823_06345) spxH 1252982..1253881 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25749.62 Da        Isoelectric Point: 4.0841

>NTDB_id=722282 NX823_RS06320 WP_015383354.1 1248435..1249091(+) (mecA) [Bacillus subtilis strain SRCM117508]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=722282 NX823_RS06320 WP_015383354.1 1248435..1249091(+) (mecA) [Bacillus subtilis strain SRCM117508]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.541

100

0.995