Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   NX819_RS06580 Genome accession   NZ_CP103351
Coordinates   1254562..1255683 (+) Length   373 a.a.
NCBI ID   WP_003232938.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM115947     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1249562..1260683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX819_RS06545 (NX819_06545) yjbB 1250203..1251420 (+) 1218 WP_080478438.1 MFS transporter -
  NX819_RS06550 (NX819_06550) yjbC 1251585..1252163 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  NX819_RS06555 (NX819_06555) spx 1252344..1252739 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  NX819_RS06560 (NX819_06560) yjbE 1252782..1253438 (-) 657 WP_003232944.1 TerC family protein -
  NX819_RS06565 (NX819_06565) - 1253608..1253748 (+) 141 WP_119122854.1 hypothetical protein -
  NX819_RS06570 (NX819_06570) mecA 1253715..1254371 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  NX819_RS06575 (NX819_06575) - 1254366..1254488 (-) 123 WP_003245684.1 hypothetical protein -
  NX819_RS06580 (NX819_06580) coiA 1254562..1255683 (+) 1122 WP_003232938.1 competence protein CoiA Machinery gene
  NX819_RS06585 (NX819_06585) pepF 1255913..1257742 (+) 1830 WP_173401378.1 oligoendopeptidase F -
  NX819_RS06590 (NX819_06590) - 1257780..1257947 (-) 168 WP_003244944.1 hypothetical protein -
  NX819_RS06595 (NX819_06595) spxH 1258261..1259160 (-) 900 WP_024573348.1 protease adaptor protein SpxH -
  NX819_RS06600 (NX819_06600) bhbI 1259157..1259555 (-) 399 WP_046380935.1 thiol management oxidoreductase -
  NX819_RS06605 (NX819_06605) cwlQ 1259810..1260544 (-) 735 WP_046380936.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43735.78 Da        Isoelectric Point: 10.1187

>NTDB_id=722204 NX819_RS06580 WP_003232938.1 1254562..1255683(+) (coiA) [Bacillus subtilis strain SRCM115947]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=722204 NX819_RS06580 WP_003232938.1 1254562..1255683(+) (coiA) [Bacillus subtilis strain SRCM115947]
CTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACACAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTTGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

99.196

100

0.992