Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   NX819_RS02355 Genome accession   NZ_CP103351
Coordinates   424420..424818 (-) Length   132 a.a.
NCBI ID   WP_017696126.1    Uniprot ID   A0AAP2LZ45
Organism   Bacillus subtilis strain SRCM115947     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 419420..429818
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX819_RS02325 (NX819_02325) yckA 420003..420683 (-) 681 WP_003234624.1 amino acid ABC transporter permease -
  NX819_RS02330 (NX819_02330) yckB 420693..421556 (-) 864 WP_259266318.1 transporter substrate-binding domain-containing protein -
  NX819_RS02335 (NX819_02335) - 421718..421915 (+) 198 WP_119122841.1 hypothetical protein -
  NX819_RS02340 (NX819_02340) yckC 421934..422384 (+) 451 Protein_418 RDD family protein -
  NX819_RS02345 (NX819_02345) yckD 422466..422798 (+) 333 WP_003246247.1 YckD family protein -
  NX819_RS02350 (NX819_02350) bglC 422950..424383 (+) 1434 WP_038428341.1 6-phospho-beta-glucosidase -
  NX819_RS02355 (NX819_02355) nin/comJ 424420..424818 (-) 399 WP_017696126.1 DNA-entry nuclease inhibitor Regulator
  NX819_RS02360 (NX819_02360) nucA/comI 424845..425294 (-) 450 WP_017696127.1 DNA-entry nuclease Machinery gene
  NX819_RS02365 (NX819_02365) tlpC 425462..427183 (-) 1722 WP_038428342.1 methyl-accepting chemotaxis protein TlpC -
  NX819_RS02370 (NX819_02370) hxlB 427294..427851 (-) 558 WP_038428343.1 6-phospho-3-hexuloisomerase -
  NX819_RS02375 (NX819_02375) hxlA 427857..428489 (-) 633 WP_003246452.1 3-hexulose-6-phosphate synthase -
  NX819_RS02380 (NX819_02380) hxlR 428723..429085 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14949.93 Da        Isoelectric Point: 4.8991

>NTDB_id=722184 NX819_RS02355 WP_017696126.1 424420..424818(-) (nin/comJ) [Bacillus subtilis strain SRCM115947]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HITENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=722184 NX819_RS02355 WP_017696126.1 424420..424818(-) (nin/comJ) [Bacillus subtilis strain SRCM115947]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCACCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCGTATGAAAAAAAAGTGACTGTTCCTTTT
CATATCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTATCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

97.727

100

0.977