Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NX810_RS17415 Genome accession   NZ_CP103350
Coordinates   3289726..3292038 (-) Length   770 a.a.
NCBI ID   WP_120363507.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM117108     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3284726..3297038
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX810_RS17375 (NX810_17375) mrpB 3285193..3285624 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  NX810_RS17380 (NX810_17380) mrpC 3285624..3285965 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  NX810_RS17385 (NX810_17385) mrpD 3285958..3287439 (+) 1482 WP_015714622.1 Na+/H+ antiporter subunit D -
  NX810_RS17390 (NX810_17390) mrpE 3287445..3287921 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  NX810_RS17395 (NX810_17395) mrpF 3287921..3288205 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  NX810_RS17400 (NX810_17400) mnhG 3288189..3288563 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  NX810_RS17405 (NX810_17405) yuxO 3288602..3288982 (-) 381 WP_015714624.1 hotdog fold thioesterase -
  NX810_RS17410 (NX810_17410) comA 3289001..3289645 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  NX810_RS17415 (NX810_17415) comP 3289726..3292038 (-) 2313 WP_120363507.1 histidine kinase Regulator
  NX810_RS17420 (NX810_17420) comX 3292054..3292275 (-) 222 WP_014480704.1 competence pheromone ComX -
  NX810_RS17425 (NX810_17425) - 3292277..3293140 (-) 864 WP_032722437.1 polyprenyl synthetase family protein -
  NX810_RS17430 (NX810_17430) degQ 3293325..3293465 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  NX810_RS17435 (NX810_17435) - 3293687..3293812 (+) 126 WP_003228793.1 hypothetical protein -
  NX810_RS17440 (NX810_17440) - 3293926..3294294 (+) 369 WP_014477834.1 hypothetical protein -
  NX810_RS17445 (NX810_17445) pdeH 3294270..3295499 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89605.77 Da        Isoelectric Point: 8.1625

>NTDB_id=722162 NX810_RS17415 WP_120363507.1 3289726..3292038(-) (comP) [Bacillus subtilis strain SRCM117108]
MYRYINVYKYLSLVFIILSFIYVIYLSYSFAFNIFVGADVKINEQGKLEVTNVLDYTDEYYSGVKKGDIILEVNGEKGSD
IQLKSGRLVNVESLIVERDNKSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFIYRINKVRKSTSAYILILFLLFVSV
AYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKYFIELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSN
LNLISFFVLVLTVSILIHKGIRKFKQKEQKSILKVLAYTNIFSFSPFIVFFAVPYVFFEKYVSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTIIVVTIFNYIQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILDVLNIDNACVYDNSKGEITLLSKNNFKDLTYTNHEQYVKNFTGDIGKI
KEFKQGFIIKIGERGDKSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=722162 NX810_RS17415 WP_120363507.1 3289726..3292038(-) (comP) [Bacillus subtilis strain SRCM117108]
ATGTACAGATATATTAACGTCTATAAATATTTGTCTCTAGTTTTTATCATTTTAAGTTTTATTTATGTTATATACCTCTC
GTATAGCTTTGCTTTTAACATCTTCGTAGGTGCGGATGTAAAGATAAATGAACAGGGTAAGTTAGAGGTCACCAATGTTT
TAGATTATACAGATGAATATTATTCAGGTGTGAAAAAGGGAGATATCATTCTTGAAGTAAATGGGGAGAAAGGCAGTGAT
ATTCAATTAAAAAGTGGAAGATTGGTCAATGTAGAAAGTTTAATTGTTGAGAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCTGTAATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTATTTATAGAATAAATAAAGTAAGAAAATCAACTTCTGCTTATATTTTAATTTTATTTTTGTTATTTGTATCAGTA
GCGTATGTAAGTGCATGTGGAGCAAGAAGAGGTGAAGAGATAAGCACTTATCTGCTTGTTCTTACTTTAGTCAGTTGTCC
GGTGTTATATATTCATTTTATATATAAATACTTTATAGAATTAGGAACAAAGTTATTCGAAAAGAAGATTTTAATCATTA
TGTATATGCTCCCGCTAATAAATCTTTTATTAGAGGACGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAAT
CTGAATTTGATTTCATTTTTTGTCCTAGTTCTTACTGTATCGATTCTTATCCATAAAGGGATAAGAAAATTTAAACAAAA
AGAGCAAAAGTCAATTTTGAAAGTCCTTGCTTATACAAATATCTTTTCTTTCAGTCCGTTTATTGTCTTTTTTGCTGTTC
CATATGTGTTTTTCGAGAAGTATGTCTCACCTTTTAGTTTGGCTGCTTTTACACTTGTTATACCTTTTTCTTTAGTATAT
CAATTTATGACTAATAGACTTTATAATATCGACTTTGTTGTGGGGCGGCTTAAGTACTACGGTTTTTTAGCCATTACACC
TACTATTATCGTAGTGACCATCTTTAATTACATTCAGCAACCAAAGGATATCTTTTATTTAGTTAAACTAACAATTGCAA
TATATGTGCTTATGTTTGCCGTTTTTTACTTTAAAGAGATTATTGACTTTCGTTTCAAGTTAAAAAGATTTACTGAAAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAATTAATAAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAGAATACAATCTTAGATGTATTAAATATAGATAATGCTTGTGTGTATGATAATTCAAAAGGAGAAATTACTCTCCTTA
GCAAGAATAACTTTAAAGATCTCACTTATACAAATCATGAGCAATATGTGAAAAATTTTACTGGTGATATCGGCAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAAATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAATTAACAAGAGATGAAATTGCATGGCTCCAAACATTAGCGTTTTATACAAATGTTTCATTGGAAAACG
TGATGAAAATAGAGGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAGGAAAAACAACGCTCCGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTGG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACAAGGGAGACGTGTCATGAGTTGCGGCCGCAGCTTCTGTAT
GATCTTGGGCTGGTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATTCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGAT
GGCGTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.437

99.87

0.564