Detailed information NTG0722106

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: NX810_RS02165
• Genome accession: NZ_CP103350
• Coordinates: 428718..429866 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain SRCM117108
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 423718..434866

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NX810_RS02145 (NX810_02145)	yclH	424095..424775 (-)	681	WP_014662766.1	ABC transporter ATP-binding protein	-
NX810_RS02150 (NX810_02150)	yclI	424791..426251 (-)	1461	WP_003234506.1	ABC transporter permease	-
NX810_RS02155 (NX810_02155)	yclJ	426464..427147 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
NX810_RS02160 (NX810_02160)	yclK	427134..428555 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
NX810_RS02165 (NX810_02165)	rapC	428718..429866 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
NX810_RS02170 (NX810_02170)	phrC	429850..429972 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
NX810_RS02175 (NX810_02175)	yczM	430072..430161 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
NX810_RS02180 (NX810_02180)	yczN	430243..430356 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
NX810_RS02185 (NX810_02185)	thrD	430510..431874 (-)	1365	WP_003234493.1	aspartate kinase	-
NX810_RS02190 (NX810_02190)	ceuB	432259..433209 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
NX810_RS02195 (NX810_02195)	yclO	433202..434149 (+)	948	WP_015252820.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=722106 NX810_RS02165 WP_003246686.1 428718..429866(+) (rapC) [Bacillus subtilis strain SRCM117108]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=722106 NX810_RS02165 WP_003246686.1 428718..429866(+) (rapC) [Bacillus subtilis strain SRCM117108]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571