Detailed information NTG0722015

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NX062_RS18850
• Genome accession: NZ_CP103328
• Coordinates: 3553047..3554192 (+)
• Length: 381 a.a.
• NCBI ID: WP_262091130.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain KC14-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3548047..3559192

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NX062_RS18825 (NX062_18835)	albF	3548062..3549342 (+)	1281	WP_029726079.1	pitrilysin family protein	-
NX062_RS18830 (NX062_18840)	albG	3549339..3550040 (+)	702	WP_029726080.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
NX062_RS18835 (NX062_18845)	ywhL	3550046..3551422 (-)	1377	WP_015250987.1	YncE family protein	-
NX062_RS18840 (NX062_18850)	ywhK	3551462..3552817 (-)	1356	WP_129110589.1	YncE family protein	-
NX062_RS18845	-	3552814..3553044 (-)	231	Protein_3655	hypothetical protein	-
NX062_RS18850 (NX062_18855)	rapF	3553047..3554192 (+)	1146	WP_262091130.1	response regulator aspartate phosphatase RapF	Regulator
NX062_RS18855 (NX062_18860)	phrF	3554176..3554295 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
NX062_RS18860 (NX062_18865)	ywhH	3554393..3554866 (+)	474	Protein_3658	YbaK/EbsC family protein	-
NX062_RS18865 (NX062_18870)	speB	3554897..3555769 (-)	873	WP_003227545.1	agmatinase	-
NX062_RS18870 (NX062_18875)	speE	3555830..3556660 (-)	831	WP_003227543.1	spermidine synthase	-
NX062_RS18875 (NX062_18880)	pbpG	3556863..3558938 (+)	2076	WP_029726084.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45617.13 Da
• Isoelectric Point: 5.1493

>NTDB_id=722015 NX062_RS18850 WP_262091130.1 3553047..3554192(+) (rapF) [Bacillus subtilis strain KC14-1]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDIIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=722015 NX062_RS18850 WP_262091130.1 3553047..3554192(+) (rapF) [Bacillus subtilis strain KC14-1]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATATAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572