Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   PVK51_RS03035 Genome accession   NZ_CP118310
Coordinates   573714..573893 (+) Length   59 a.a.
NCBI ID   WP_038432505.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 20154051     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 568714..578893
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PVK51_RS02985 (PVK51_02955) - 568785..569084 (+) 300 WP_002988799.1 hypothetical protein -
  PVK51_RS02990 (PVK51_02960) - 569081..569266 (+) 186 WP_011184796.1 holin -
  PVK51_RS02995 (PVK51_02965) - 569379..570581 (+) 1203 WP_397611646.1 glucosaminidase domain-containing protein -
  PVK51_RS03000 (PVK51_02970) - 570767..571006 (-) 240 WP_003055855.1 hypothetical protein -
  PVK51_RS03005 (PVK51_02975) - 571075..571290 (-) 216 WP_023611751.1 hypothetical protein -
  PVK51_RS03010 (PVK51_02980) - 571292..571894 (-) 603 WP_023611748.1 AP endonuclease -
  PVK51_RS03015 (PVK51_02985) acrIIA3 571894..572268 (-) 375 WP_023611744.1 anti-CRISPR protein AcrIIA3 -
  PVK51_RS03020 (PVK51_02990) - 572401..572757 (-) 357 WP_003055891.1 hypothetical protein -
  PVK51_RS03025 (PVK51_02995) - 572934..573233 (-) 300 WP_247522168.1 hypothetical protein -
  PVK51_RS03030 (PVK51_03000) - 573272..573511 (-) 240 WP_003055856.1 hypothetical protein -
  PVK51_RS03035 (PVK51_03005) prx 573714..573893 (+) 180 WP_038432505.1 hypothetical protein Regulator
  PVK51_RS03040 (PVK51_03010) - 574238..574612 (-) 375 WP_397611647.1 helix-turn-helix domain-containing protein -
  PVK51_RS03045 (PVK51_03015) - 574782..575003 (+) 222 WP_002988211.1 helix-turn-helix domain-containing protein -
  PVK51_RS03050 (PVK51_03020) - 575083..577365 (-) 2283 WP_002988216.1 Xaa-Pro dipeptidyl-peptidase -
  PVK51_RS03055 (PVK51_03025) - 577387..578046 (-) 660 WP_014635687.1 Crp/Fnr family transcriptional regulator -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6792.86 Da        Isoelectric Point: 4.0650

>NTDB_id=722004 PVK51_RS03035 WP_038432505.1 573714..573893(+) (prx) [Streptococcus pyogenes strain 20154051]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPGEPVRPWEVMTVEVAGEVLMELR

Nucleotide


Download         Length: 180 bp        

>NTDB_id=722004 PVK51_RS03035 WP_038432505.1 573714..573893(+) (prx) [Streptococcus pyogenes strain 20154051]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
TGGACAGATTTTTGATTATGTTTTGCCCGGTGAGCCTGTGAGACCGTGGGAGGTTATGACAGTTGAAGTAGCGGGAGAAG
TGCTAATGGAATTGAGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

75.862

98.305

0.746
  prx Streptococcus pyogenes MGAS315

75.862

98.305

0.746
  prx Streptococcus pyogenes MGAS8232

74.138

98.305

0.729
  prx Streptococcus pyogenes MGAS315

74.138

98.305

0.729
  prx Streptococcus pyogenes MGAS315

90.476

71.186

0.644
  prx Streptococcus pyogenes MGAS315

85.366

69.492

0.593
  prx Streptococcus pyogenes MGAS315

75.61

69.492

0.525