Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   PVK49_RS02190 Genome accession   NZ_CP118306
Coordinates   424976..426010 (+) Length   344 a.a.
NCBI ID   WP_002994331.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 20154608     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 419976..431010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PVK49_RS02160 (PVK49_02155) tsaE 421041..421502 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  PVK49_RS02165 (PVK49_02160) - 421477..422001 (+) 525 WP_020905405.1 GNAT family N-acetyltransferase -
  PVK49_RS02170 (PVK49_02165) brpA 422010..423293 (+) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  PVK49_RS02175 (PVK49_02170) - 423404..423760 (-) 357 WP_047235695.1 hypothetical protein -
  PVK49_RS02180 (PVK49_02175) - 423757..424176 (-) 420 WP_002983376.1 HIT family protein -
  PVK49_RS02185 (PVK49_02180) pptA 424248..424973 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  PVK49_RS02190 (PVK49_02185) pptB 424976..426010 (+) 1035 WP_002994331.1 ABC transporter permease Regulator
  PVK49_RS02195 (PVK49_02190) ccrZ 426074..426865 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  PVK49_RS02200 (PVK49_02195) trmB 426865..427500 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  PVK49_RS02210 (PVK49_02205) rimP 427759..428295 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  PVK49_RS02215 (PVK49_02210) nusA 428470..429627 (+) 1158 WP_047235696.1 transcription termination factor NusA -
  PVK49_RS02220 (PVK49_02215) rnpM 429643..429939 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  PVK49_RS02225 (PVK49_02220) - 429932..430234 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40242.46 Da        Isoelectric Point: 10.3713

>NTDB_id=721626 PVK49_RS02190 WP_002994331.1 424976..426010(+) (pptB) [Streptococcus pyogenes strain 20154608]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=721626 PVK49_RS02190 WP_002994331.1 424976..426010(+) (pptB) [Streptococcus pyogenes strain 20154608]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAGCAAAATAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAACGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGGCTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427