Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EL334_RS10075 Genome accession   NZ_AP019192
Coordinates   1858593..1859630 (-) Length   345 a.a.
NCBI ID   WP_000727277.1    Uniprot ID   A0A0B7LHQ0
Organism   Streptococcus pneumoniae strain ASP0581     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1853593..1864630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL334_RS10050 (ASP0581_18760) - 1854332..1855663 (-) 1332 WP_000390042.1 hemolysin family protein -
  EL334_RS10055 (ASP0581_18770) endA 1855954..1856778 (-) 825 WP_001036786.1 DNA-entry nuclease EndA Machinery gene
  EL334_RS10060 (ASP0581_18780) - 1856817..1857005 (-) 189 WP_001813390.1 DNA-directed RNA polymerase subunit beta -
  EL334_RS10065 (ASP0581_18790) murA 1856998..1858281 (-) 1284 WP_000358028.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  EL334_RS10070 (ASP0581_18800) - 1858305..1858535 (-) 231 WP_000250384.1 DUF1146 family protein -
  EL334_RS10075 (ASP0581_18810) sepM 1858593..1859630 (-) 1038 WP_000727277.1 SepM family pheromone-processing serine protease Regulator
  EL334_RS10080 (ASP0581_18820) coaD 1859614..1860102 (-) 489 WP_001280746.1 pantetheine-phosphate adenylyltransferase -
  EL334_RS10085 (ASP0581_18830) rsmD 1860092..1860631 (-) 540 WP_000706957.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EL334_RS10090 (ASP0581_18840) asnA 1860696..1861688 (-) 993 WP_033705591.1 aspartate--ammonia ligase -
  EL334_RS10100 (ASP0581_18850) - 1861799..1862482 (-) 684 WP_001016913.1 Bax inhibitor-1 family protein -
  EL334_RS10105 (ASP0581_18860) - 1862538..1863278 (-) 741 WP_000152704.1 TrmH family RNA methyltransferase -
  EL334_RS10110 (ASP0581_18870) - 1863312..1863590 (+) 279 WP_001174613.1 acylphosphatase -
  EL334_RS10115 (ASP0581_18880) yidC 1863668..1864594 (+) 927 WP_000835941.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37537.57 Da        Isoelectric Point: 5.0724

>NTDB_id=72162 EL334_RS10075 WP_000727277.1 1858593..1859630(-) (sepM) [Streptococcus pneumoniae strain ASP0581]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=72162 EL334_RS10075 WP_000727277.1 1858593..1859630(-) (sepM) [Streptococcus pneumoniae strain ASP0581]
ATGAAAAAAAAGATTAGATGGCCTTTGTATGTCATTGCGGCCTTGATTGTGACCTTCTTGGCATTTGTGGTGCCTTTGCC
CTACTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCTACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGAATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGACTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGAGTTTATGTTT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACAGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGATTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAGATTATCACCTTGGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGACCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGTCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGTATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCCGGACGCGAAAAACAACTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LHQ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment