Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   PUW21_RS20165 Genome accession   NZ_CP118167
Coordinates   3842334..3842708 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain 21855     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3837334..3847708
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW21_RS20140 (PUW21_20140) - 3837498..3837659 (-) 162 WP_003227632.1 hypothetical protein -
  PUW21_RS20145 (PUW21_20145) glpX 3837874..3838839 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  PUW21_RS20150 (PUW21_20150) murAB 3838870..3840159 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  PUW21_RS20155 (PUW21_20155) fsa 3840538..3841176 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  PUW21_RS20160 (PUW21_20160) fbaA 3841296..3842153 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  PUW21_RS20165 (PUW21_20165) letA 3842334..3842708 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  PUW21_RS20170 (PUW21_20170) ywjG 3842874..3843395 (+) 522 WP_024572667.1 DUF2529 domain-containing protein -
  PUW21_RS20175 (PUW21_20175) pyrG 3843477..3845084 (-) 1608 WP_110109502.1 CTP synthase (glutamine hydrolyzing) -
  PUW21_RS20180 (PUW21_20180) rpoE 3845326..3845847 (-) 522 WP_003227609.1 DNA-directed RNA polymerase subunit delta -
  PUW21_RS20185 (PUW21_20185) acdA 3846030..3847169 (-) 1140 WP_110109503.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=721583 PUW21_RS20165 WP_003227621.1 3842334..3842708(-) (letA) [Bacillus subtilis strain 21855]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=721583 PUW21_RS20165 WP_003227621.1 3842334..3842708(-) (letA) [Bacillus subtilis strain 21855]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCTGGCATGGACGGAATCGAAATCCTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363