Detailed information NTG0721273

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: PUW74_RS11180
• Genome accession: NZ_CP118080
• Coordinates: 2178706..2179815 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain VSI14
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2173706..2184815

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUW74_RS11155 (PUW74_11155)	-	2174078..2174917 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
PUW74_RS11160 (PUW74_11160)	pgsA	2174917..2175459 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
PUW74_RS11165 (PUW74_11165)	-	2175582..2176865 (-)	1284	WP_000217765.1	pitrilysin family protein	-
PUW74_RS11170 (PUW74_11170)	-	2176867..2178111 (-)	1245	WP_000706190.1	pitrilysin family protein	-
PUW74_RS11175 (PUW74_11175)	yaaA	2178350..2178703 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
PUW74_RS11180 (PUW74_11180)	recF	2178706..2179815 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
PUW74_RS11185 (PUW74_11185)	-	2179827..2180693 (-)	867	WP_000398683.1	GRP family sugar transporter	-
PUW74_RS11190 (PUW74_11190)	-	2180749..2181411 (-)	663	WP_001871057.1	helix-turn-helix transcriptional regulator	-
PUW74_RS11195 (PUW74_11195)	guaB	2181486..2182967 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
PUW74_RS11200 (PUW74_11200)	-	2183124..2183609 (-)	486	WP_001034427.1	arginine repressor	-
PUW74_RS11205 (PUW74_11205)	-	2183619..2184299 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=721273 PUW74_RS11180 WP_000264870.1 2178706..2179815(+) (recF) [Streptococcus agalactiae strain VSI14]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=721273 PUW74_RS11180 WP_000264870.1 2178706..2179815(+) (recF) [Streptococcus agalactiae strain VSI14]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447