Detailed information NTG0721246

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: NUW46_RS04090
• Genome accession: NZ_CP103058
• Coordinates: 890460..891848 (-)
• Length: 462 a.a.
• NCBI ID: WP_418141425.1
• Uniprot ID: -
• Organism: Marinobacter sp. MA
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 885460..896848

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NUW46_RS04070 (NUW46_04075)	-	885826..886122 (+)	297	WP_418141421.1	hypothetical protein	-
NUW46_RS04075 (NUW46_04080)	-	886138..889308 (+)	3171	WP_418141422.1	pilus assembly protein	-
NUW46_RS04080 (NUW46_04085)	-	889314..889781 (+)	468	WP_418141423.1	type IV pilin protein	-
NUW46_RS04085 (NUW46_04090)	-	889789..890358 (-)	570	WP_418141424.1	GspH/FimT family protein	-
NUW46_RS04090 (NUW46_04095)	pilR	890460..891848 (-)	1389	WP_418141425.1	sigma-54-dependent transcriptional regulator	Regulator
NUW46_RS04095 (NUW46_04100)	-	891906..893561 (-)	1656	WP_418141426.1	sensor histidine kinase	-
NUW46_RS04100 (NUW46_04105)	-	893655..895325 (+)	1671	WP_418141427.1	NAD+ synthase	-
NUW46_RS04105 (NUW46_04110)	-	895378..896211 (-)	834	WP_418141428.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 462 a.a.
• Molecular weight: 50913.09 Da
• Isoelectric Point: 4.9723

>NTDB_id=721246 NUW46_RS04090 WP_418141425.1 890460..891848(-) (pilR) [Marinobacter sp. MA]
MTTYTALIVDDEPDIRDLLEITLTRMGITTLTAPDLTSARKLLEQNTTHLCLTDMNLPDGNGIELVQWIQKHSPATPVAV
ITAYGNMDTAIESLKAGAFDFVSKPVELPRLRELVNSALKLAEPKADTEDTADEPGLLLGKSPEIRKLRNQTRKLARSQA
PVFISGESGSGKELVARMIHLQGPRREGAFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKDGLFRSANGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGSFRQDLFYRINVIELAVPPLRERPDDIPLLS
NHILQRIAREYECDPASLTPAAVERLRSYEFPGNVRELENVLERAFTLCDADQIDAEDLHLGNGVQHPSSATQIIAEGQS
GEGEGVAVPDGEIDLEGYLEKIERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME

Nucleotide

• Length: 1389 bp

>NTDB_id=721246 NUW46_RS04090 WP_418141425.1 890460..891848(-) (pilR) [Marinobacter sp. MA]
ATGACCACATACACAGCGCTGATCGTTGATGATGAACCGGACATCCGGGATTTACTTGAGATCACCCTCACACGGATGGG
GATAACCACGCTCACGGCACCTGACCTCACCAGCGCCCGAAAATTGCTGGAACAAAACACCACCCATCTTTGCCTGACCG
ACATGAACCTGCCAGACGGTAACGGCATCGAACTCGTACAGTGGATTCAGAAGCATTCTCCCGCCACGCCTGTTGCTGTG
ATTACAGCCTACGGCAACATGGATACCGCGATCGAGTCTCTCAAAGCCGGGGCTTTTGATTTCGTATCCAAGCCGGTGGA
ACTGCCCCGTTTAAGGGAGTTGGTCAATAGCGCTCTCAAATTAGCCGAGCCAAAGGCAGACACAGAAGATACAGCCGACG
AGCCAGGCCTGTTACTGGGTAAATCGCCAGAGATACGCAAACTCCGTAACCAGACCCGAAAACTGGCCAGAAGCCAGGCG
CCCGTTTTTATCAGCGGCGAGTCCGGAAGCGGTAAGGAGCTGGTTGCCAGAATGATCCATCTGCAGGGCCCCCGCCGAGA
AGGAGCATTTATCGCGGTTAACTGCGGCGCGATTCCCTCCGAACTGATGGAAAGCGAATTCTTCGGCCACAAAAAAGGCA
GCTTTACCGGGGCCGTGGAGAATAAAGATGGCTTGTTCCGGTCAGCCAATGGCGGCACCTTGTTCCTCGATGAAGTAGCT
GACCTGCCCCTCGCCATGCAGGTGAAACTGCTCCGGGCTATTCAGGAAAAAGCAGTTCGTCCGGTTGGCGATACGAAGGA
GGTCCCCGTTGACATCCGGGTACTGAGTGCCACCCACAAGAACCTGCCGGAACTTGTTCAGGAAGGCAGCTTCCGCCAGG
ATCTTTTCTACCGCATTAACGTGATAGAACTCGCAGTGCCGCCCCTGAGAGAACGGCCGGATGATATTCCACTGCTCTCG
AACCACATTCTTCAGCGGATTGCGAGAGAGTATGAGTGTGACCCAGCTTCGTTAACACCTGCCGCCGTCGAAAGGCTGAG
AAGCTATGAGTTCCCCGGAAATGTTCGGGAACTGGAAAACGTGTTGGAGCGGGCTTTCACCCTCTGCGACGCTGACCAGA
TTGATGCTGAGGATCTTCACCTGGGGAACGGAGTGCAACATCCCTCGTCCGCCACACAGATTATTGCAGAAGGCCAGTCC
GGCGAGGGAGAGGGGGTTGCTGTTCCTGATGGTGAAATCGATCTAGAGGGATACCTCGAGAAGATTGAACGACAGGCGAT
TGAGAAGGCGCTTGAGGCGACCCGATGGAACAAGACTGCTGCGGCCAAAAGACTGGGAATCAGTTTTCGGGCGCTGAGGT
ATCGGTTGAAGAAGTTGGGAATGGAGTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (138-304)

• Bacterial regulatory protein, Fis family (HTH_8) (419-459)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.931	100	0.641
pilR	Acinetobacter baumannii strain A118	53.696	99.567	0.535